(67 nodes) Bounding membrane of organelle network (Streptomyces puniciscabiei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOR37546.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)
	AOR36752.1	IS256 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
	AOR36658.1	FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (538 aa)
	AOR36565.1	Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
	AOR36106.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (525 aa)
	AOR36090.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
	AOR37580.1	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
	AOR35939.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)
	AOR35933.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
	AOR35727.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (610 aa)
	AOR35724.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	AOR35719.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (971 aa)
	AOR35660.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	AOR35645.1	NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
	AOR35610.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (714 aa)
	BFF78_34635	Diguanylate cyclase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
	AOR35526.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
	AOR35478.1	Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa)
	AOR35315.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
	AOR35144.1	HNH nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)
	AOR35107.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	AOR34986.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	BFF78_31045	Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
	AOR34699.1	NADPH-dependent F420 reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
	AOR34676.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (761 aa)
	AOR34646.1	Nonspecific lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
	AOR34518.1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)
	AOR34479.1	Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
	AOR34303.1	Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
	AOR33939.1	Cation diffusion facilitator family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	AOR33861.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
	AOR33840.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	AOR33422.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
	AOR32930.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	AOR37182.1	Aromatic acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
	AOR32804.1	Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	AOR32725.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (985 aa)
	AOR32356.1	Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
	AOR32133.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
	AOR32105.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
	AOR31981.1	NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	AOR31908.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
	AOR31907.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)
	AOR31542.1	Activator protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
	AOR31415.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (60 aa)
	alc	Allantoicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the allantoicase family. (371 aa)
	AOR31218.1	MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
	AOR31129.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
	AOR36973.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	AOR31034.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (950 aa)
	AOR30987.1	IS256 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
	AOR30961.1	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (72 aa)
	AOR36947.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	AOR30928.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	AOR30906.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (675 aa)
	AOR36918.1	MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
	AOR30700.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)
	AOR30320.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
	AOR30246.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
	AOR30109.1	Alkyldihydroxyacetonephosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)
	AOR29900.1	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (281 aa)
	AOR36800.1	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)
	AOR29877.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (974 aa)
	AOR29865.1	IS256 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
	AOR29795.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1488 aa)
	AOR29747.1	IS256 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
	AOR29723.1	IS256 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)

Your Current Organism:

Streptomyces puniciscabiei

NCBI taxonomy Id: 164348
Other names: KACC 20253, LMG 21391, LMG:21391, S. puniciscabiei, Streptomyces puniciscabiei Park et al. 2003, Streptomyces sp. S77, strain S77

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOR29795.1	AOR29877.1	BFF78_00650	BFF78_01175	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.632
AOR29795.1	AOR34676.1	BFF78_00650	BFF78_29740	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.459
AOR29877.1	AOR29795.1	BFF78_01175	BFF78_00650	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.632
AOR29877.1	AOR34676.1	BFF78_01175	BFF78_29740	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.790
AOR30928.1	AOR36947.1	BFF78_07570	BFF78_07575	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.899
AOR34676.1	AOR29795.1	BFF78_29740	BFF78_00650	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.459
AOR34676.1	AOR29877.1	BFF78_29740	BFF78_01175	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.790
AOR34676.1	AOR35144.1	BFF78_29740	BFF78_32425	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	HNH nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
AOR34676.1	AOR35610.1	BFF78_29740	BFF78_35110	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.502
AOR35144.1	AOR34676.1	BFF78_32425	BFF78_29740	HNH nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.422
AOR35478.1	AOR36565.1	BFF78_34345	BFF78_40810	Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
AOR35610.1	AOR34676.1	BFF78_35110	BFF78_29740	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.502
AOR36565.1	AOR35478.1	BFF78_40810	BFF78_34345	Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
AOR36947.1	AOR30928.1	BFF78_07575	BFF78_07570	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.899

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