Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOR30356.1 | AOR33090.1 | BFF78_04175 | BFF78_20280 | Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.903 |
| AOR30356.1 | AOR33665.1 | BFF78_04175 | BFF78_23680 | Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dimethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
| AOR30356.1 | AOR36399.1 | BFF78_04175 | BFF78_39855 | Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.484 |
| AOR30356.1 | gltD | BFF78_04175 | BFF78_31055 | Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.483 |
| AOR30458.1 | AOR33090.1 | BFF78_04810 | BFF78_20280 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.684 |
| AOR30458.1 | AOR33665.1 | BFF78_04810 | BFF78_23680 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dimethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.884 |
| AOR30458.1 | AOR36399.1 | BFF78_04810 | BFF78_39855 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
| AOR30458.1 | nuoI | BFF78_04810 | BFF78_17845 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.799 |
| AOR30458.1 | nuoI-2 | BFF78_04810 | BFF78_18035 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.799 |
| AOR32251.1 | AOR33665.1 | BFF78_15310 | BFF78_23680 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Dimethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.404 |
| AOR32251.1 | AOR36399.1 | BFF78_15310 | BFF78_39855 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
| AOR32251.1 | nuoI | BFF78_15310 | BFF78_17845 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.410 |
| AOR32251.1 | nuoI-2 | BFF78_15310 | BFF78_18035 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.410 |
| AOR32294.1 | AOR32487.1 | BFF78_15540 | BFF78_16715 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.913 |
| AOR32294.1 | AOR33090.1 | BFF78_15540 | BFF78_20280 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.538 |
| AOR32294.1 | AOR33665.1 | BFF78_15540 | BFF78_23680 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dimethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.845 |
| AOR32294.1 | AOR36399.1 | BFF78_15540 | BFF78_39855 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
| AOR32294.1 | nuoI | BFF78_15540 | BFF78_17845 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.799 |
| AOR32294.1 | nuoI-2 | BFF78_15540 | BFF78_18035 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.799 |
| AOR32487.1 | AOR32294.1 | BFF78_16715 | BFF78_15540 | Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.913 |
page 1 of 4