STRINGSTRING
rnfG rnfG ORJ27366.1 ORJ27366.1 dld dld ORJ27422.1 ORJ27422.1 ORJ27434.1 ORJ27434.1 ORJ27499.1 ORJ27499.1 ORJ27501.1 ORJ27501.1 sdhB sdhB ORJ27507.1 ORJ27507.1 ORJ27509.1 ORJ27509.1 ORJ27531.1 ORJ27531.1 ORJ27035.1 ORJ27035.1 msrQ msrQ ORJ26864.1 ORJ26864.1 ORJ26865.1 ORJ26865.1 ORJ26866.1 ORJ26866.1 ORJ26867.1 ORJ26867.1 azoR azoR ORJ26493.1 ORJ26493.1 ORJ26532.1 ORJ26532.1 ORJ26298.1 ORJ26298.1 ORJ26119.1 ORJ26119.1 ORJ26193.1 ORJ26193.1 ORJ26000.1 ORJ26000.1 rnfA rnfA rnfB rnfB rnfC rnfC rnfD rnfD rnfE rnfE ORJ26091.1 ORJ26091.1 ORJ25634.1 ORJ25634.1 dld-2 dld-2 ORJ25504.1 ORJ25504.1 ORJ25280.1 ORJ25280.1 ORJ25077.1 ORJ25077.1 dipZ dipZ ORJ25044.1 ORJ25044.1 ORJ24938.1 ORJ24938.1 nuoA nuoA nuoB nuoB nuoC nuoC ORJ24792.1 ORJ24792.1 ORJ24793.1 ORJ24793.1 ORJ24847.1 ORJ24847.1 ORJ24796.1 ORJ24796.1 nuoK nuoK ORJ24798.1 ORJ24798.1 ORJ24799.1 ORJ24799.1 nuoN nuoN ORJ24805.1 ORJ24805.1 ORJ24821.1 ORJ24821.1 ORJ24740.1 ORJ24740.1 ORJ24704.1 ORJ24704.1 ORJ24709.1 ORJ24709.1 ORJ24437.1 ORJ24437.1 ORJ24449.1 ORJ24449.1 ORJ24352.1 ORJ24352.1 ORJ24279.1 ORJ24279.1 ORJ24177.1 ORJ24177.1 ORJ24120.1 ORJ24120.1 ORJ23916.1 ORJ23916.1 ORJ23840.1 ORJ23840.1 ORJ23865.1 ORJ23865.1 dsbB dsbB ORJ23572.1 ORJ23572.1 ORJ23451.1 ORJ23451.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rnfGElectron transport complex subunit RsxG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. (210 aa)
ORJ27366.1Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
dldD-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family. (572 aa)
ORJ27422.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
ORJ27434.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
ORJ27499.1Cyd operon protein YbgT; Derived by automated computational analysis using gene prediction method: Protein Homology. (37 aa)
ORJ27501.1Cytochrome d terminal oxidase subunit 1; Part of the aerobic respiratory chain; catalyzes the ubiquinol to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology. (522 aa)
sdhBPart of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
ORJ27507.1Succinate dehydrogenase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (588 aa)
ORJ27509.1Succinate dehydrogenase cytochrome b556 large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa)
ORJ27531.1Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. (175 aa)
ORJ27035.1Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
msrQSulfoxide reductase heme-binding subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalyti [...] (200 aa)
ORJ26864.1Cytochrome o ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
ORJ26865.1Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (663 aa)
ORJ26866.1Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
ORJ26867.1Cytochrome o ubiquinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
azoRFMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. (205 aa)
ORJ26493.1Cytochrome ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
ORJ26532.1NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
ORJ26298.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
ORJ26119.1Biotin transporter BioY; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (770 aa)
ORJ26193.1Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)
ORJ26000.1Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
rnfAElectron transport complex subunit RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (193 aa)
rnfBElectron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (188 aa)
rnfCElectron transport complex subunit RsxC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (698 aa)
rnfDElectron transport complex subunit RsxD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. (350 aa)
rnfEElectron transport complex subunit RsxE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (230 aa)
ORJ26091.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
ORJ25634.1Protoporphyrinogen oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
dld-2D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family. (564 aa)
ORJ25504.1Biotin transporter BioY; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (765 aa)
ORJ25280.1Biotin transporter BioY; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (752 aa)
ORJ25077.1Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
dipZProtein-disulfide reductase DsbD; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. (585 aa)
ORJ25044.1Gluconate 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
ORJ24938.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
nuoANADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (154 aa)
nuoBNADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (224 aa)
nuoCNADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. (599 aa)
ORJ24792.1NADH-quinone oxidoreductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
ORJ24793.1NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (454 aa)
ORJ24847.1NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (908 aa)
ORJ24796.1NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (187 aa)
nuoKNADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (100 aa)
ORJ24798.1NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology. (615 aa)
ORJ24799.1NADH-quinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology. (509 aa)
nuoNNADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (485 aa)
ORJ24805.12Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
ORJ24821.1Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
ORJ24740.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa)
ORJ24704.1Flavodoxin FldB; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. (172 aa)
ORJ24709.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
ORJ24437.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
ORJ24449.1Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)
ORJ24352.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
ORJ24279.1Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
ORJ24177.1Glutaredoxin; Functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)
ORJ24120.1Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. (154 aa)
ORJ23916.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
ORJ23840.1Cytochrome C554; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)
ORJ23865.1Flavodoxin; An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
dsbBDisulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. (176 aa)
ORJ23572.1Derived by automated computational analysis using gene prediction method: Protein Homology. (483 aa)
ORJ23451.1Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)
Your Current Organism:
Rouxiella badensis
NCBI taxonomy Id: 1646377
Other names: CIP 111153, DSM 100043, R. badensis, Rouxiella badensis Le Fleche-Mateos et al. 2017, Rouxiella sp. 323, Rouxiella sp. 421, Rouxiella sp. DSM 100043, strain 323
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