STRINGSTRING
AMS11211.1 AMS11211.1 arcC arcC argF argF arcA arcA ogt ogt AMS11216.1 AMS11216.1 AMS11217.1 AMS11217.1 AMS11218.1 AMS11218.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMS11211.1C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
arcCCarbamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbamate kinase family. (311 aa)
argFOrnithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (330 aa)
arcAArginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
ogtCysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
AMS11216.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa)
AMS11217.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (564 aa)
AMS11218.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
Your Current Organism:
Erysipelothrix rhusiopathiae
NCBI taxonomy Id: 1648
Other names: ATCC 19414, Bacillus insidiosus, Bacillus rhusiopathiae suis, Bacterium rhusiopathiae, CCUG 221, CIP 105957, DSM 5055, E. rhusiopathiae, Erysipelothrix erysipeloides, Erysipelothrix insidiosa, Erysipelothrix murisepticus, Erysipelothrix porci, NCTC 8163
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