STRINGSTRING
panE panE yhfE yhfE AMS10647.1 AMS10647.1 AMS10648.1 AMS10648.1 pepE pepE AMS10651.1 AMS10651.1 AMS10652.1 AMS10652.1 cadC cadC cadA-2 cadA-2 AMS10655.1 AMS10655.1 AMS10656.1 AMS10656.1 AMS10657.1 AMS10657.1 AMS10658.1 AMS10658.1 ocd2 ocd2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
panE2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (311 aa)
yhfEAminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
AMS10647.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
AMS10648.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (60 aa)
pepEDipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S51 family. (241 aa)
AMS10651.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
AMS10652.1Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (604 aa)
cadCTranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)
cadA-2ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (696 aa)
AMS10655.1Inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
AMS10656.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)
AMS10657.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
AMS10658.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
ocd2Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
Your Current Organism:
Erysipelothrix rhusiopathiae
NCBI taxonomy Id: 1648
Other names: ATCC 19414, Bacillus insidiosus, Bacillus rhusiopathiae suis, Bacterium rhusiopathiae, CCUG 221, CIP 105957, DSM 5055, E. rhusiopathiae, Erysipelothrix erysipeloides, Erysipelothrix insidiosa, Erysipelothrix murisepticus, Erysipelothrix porci, NCTC 8163
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