STRINGSTRING
AKQ40781.2 AKQ40781.2 AKQ40782.2 AKQ40782.2 AKQ40783.1 AKQ40783.1 AKQ40816.2 AKQ40816.2 AKQ40817.2 AKQ40817.2 AKQ40820.1 AKQ40820.1 AKQ40823.1 AKQ40823.1 AKQ40852.2 AKQ40852.2 AKQ40853.1 AKQ40853.1 AKQ40854.2 AKQ40854.2 AKQ40855.1 AKQ40855.1 AKQ40856.1 AKQ40856.1 AKQ40857.1 AKQ40857.1 AKQ40858.2 AKQ40858.2 AKQ40859.2 AKQ40859.2 AKQ40866.1 AKQ40866.1 AKQ40869.2 AKQ40869.2 AKQ40876.1 AKQ40876.1 AKQ40879.2 AKQ40879.2 AKQ43016.2 AKQ43016.2 AKQ40886.2 AKQ40886.2 AKQ40888.2 AKQ40888.2 AKQ40896.2 AKQ40896.2 AKQ40897.2 AKQ40897.2 ruvC ruvC AKQ43024.2 AKQ43024.2 AKQ40916.1 AKQ40916.1 AKQ40920.1 AKQ40920.1 gyrB gyrB AKQ40961.1 AKQ40961.1 AKQ40964.1 AKQ40964.1 ung ung AKQ41003.1 AKQ41003.1 AKQ43052.1 AKQ43052.1 AKQ43056.2 AKQ43056.2 AKQ41034.1 AKQ41034.1 xseA xseA AKQ41088.1 AKQ41088.1 dnaQ dnaQ AKQ41122.1 AKQ41122.1 AKQ41172.1 AKQ41172.1 mutS mutS polA polA AKQ41315.1 AKQ41315.1 AKQ41360.2 AKQ41360.2 AKQ41361.2 AKQ41361.2 AKQ43141.2 AKQ43141.2 AKQ41363.2 AKQ41363.2 AKQ41375.1 AKQ41375.1 nth nth dnaA dnaA mutM mutM ruvA ruvA ruvB ruvB AKQ43196.2 AKQ43196.2 AKQ41518.1 AKQ41518.1 AKQ41530.1 AKQ41530.1 AKQ41537.1 AKQ41537.1 AKQ41539.1 AKQ41539.1 AKQ43200.2 AKQ43200.2 AKQ41545.1 AKQ41545.1 AKQ41547.2 AKQ41547.2 AKQ41580.1 AKQ41580.1 AKQ41582.1 AKQ41582.1 AKQ41583.1 AKQ41583.1 AKQ41589.1 AKQ41589.1 AKQ41594.2 AKQ41594.2 AKQ41595.2 AKQ41595.2 AKQ41596.1 AKQ41596.1 AKQ41597.1 AKQ41597.1 AKQ41607.1 AKQ41607.1 AKQ41608.1 AKQ41608.1 AKQ41609.1 AKQ41609.1 AKQ41610.1 AKQ41610.1 AKQ41640.1 AKQ41640.1 AKQ41645.1 AKQ41645.1 AKQ43212.1 AKQ43212.1 AKQ41657.1 AKQ41657.1 AKQ41658.1 AKQ41658.1 AKQ41673.1 AKQ41673.1 AKQ41701.1 AKQ41701.1 AKQ41730.1 AKQ41730.1 uvrB uvrB smc smc AKQ41791.2 AKQ41791.2 AKQ41822.1 AKQ41822.1 AKQ43252.2 AKQ43252.2 AKQ41831.2 AKQ41831.2 AKQ41832.2 AKQ41832.2 AKQ43254.2 AKQ43254.2 AKQ41884.2 AKQ41884.2 AKQ41885.1 AKQ41885.1 AKQ41886.2 AKQ41886.2 uvrA uvrA recA recA AKQ41929.1 AKQ41929.1 AKQ43282.2 AKQ43282.2 AKQ41979.2 AKQ41979.2 ligA ligA AKQ42029.1 AKQ42029.1 AKQ42030.2 AKQ42030.2 dnaX dnaX topA topA xerC xerC AKQ42137.1 AKQ42137.1 AKQ42151.1 AKQ42151.1 mfd mfd AKQ42164.2 AKQ42164.2 AKQ42166.1 AKQ42166.1 lexA lexA gyrA gyrA parE parE AKQ42273.1 AKQ42273.1 dnaJ dnaJ radA radA AKQ42298.1 AKQ42298.1 AKQ42300.1 AKQ42300.1 AKQ42309.1 AKQ42309.1 mutL mutL AKQ42338.2 AKQ42338.2 AKQ42339.1 AKQ42339.1 AKQ42340.2 AKQ42340.2 dnaG dnaG xseB xseB AKQ42374.1 AKQ42374.1 dnaE2 dnaE2 AKQ42384.1 AKQ42384.1 AKQ42385.1 AKQ42385.1 AKQ42395.1 AKQ42395.1 AKQ43383.2 AKQ43383.2 priA priA AKQ42413.2 AKQ42413.2 AKQ43390.2 AKQ43390.2 parC parC AKQ42464.1 AKQ42464.1 recR recR AKQ42473.2 AKQ42473.2 uvrC uvrC AKQ42503.1 AKQ42503.1 AKQ42509.1 AKQ42509.1 AKQ42530.2 AKQ42530.2 AKQ42531.1 AKQ42531.1 AKQ42532.2 AKQ42532.2 AKQ42539.2 AKQ42539.2 tdk tdk AKQ42572.1 AKQ42572.1 AKQ43416.2 AKQ43416.2 recF recF AKQ42594.1 AKQ42594.1 AKQ42627.1 AKQ42627.1 AKQ42725.1 AKQ42725.1 AKQ42746.1 AKQ42746.1 AKQ42755.1 AKQ42755.1 dinB dinB AKQ42770.1 AKQ42770.1 ku ku AKQ42773.2 AKQ42773.2 AKQ42775.1 AKQ42775.1 AKQ42776.2 AKQ42776.2 AKQ42785.2 AKQ42785.2 AKQ42808.1 AKQ42808.1 AKQ43472.2 AKQ43472.2 AKQ42819.1 AKQ42819.1 AKQ42821.1 AKQ42821.1 AKQ42822.2 AKQ42822.2 AKQ42824.1 AKQ42824.1 AKQ42828.1 AKQ42828.1 AKQ42829.1 AKQ42829.1 AKQ42934.2 AKQ42934.2 AKQ42954.2 AKQ42954.2 AKQ42955.2 AKQ42955.2 ANC50362.1 ANC50362.1 ANC50378.1 ANC50378.1 ANC50445.1 ANC50445.1 ANC50485.1 ANC50485.1 ANC50508.1 ANC50508.1 ANC50549.1 ANC50549.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKQ40781.2Integrase; Belongs to the 'phage' integrase family. (348 aa)
AKQ40782.2IS511, transposase OrfB. (302 aa)
AKQ40783.1Hypothetical protein. (88 aa)
AKQ40816.2IS511, transposase OrfB. (302 aa)
AKQ40817.2Hypothetical protein. (88 aa)
AKQ40820.1Transposase. (102 aa)
AKQ40823.1Transposase, IS4. (449 aa)
AKQ40852.2Hypothetical protein. (88 aa)
AKQ40853.1Transposase IS116/IS110/IS902 family protein. (350 aa)
AKQ40854.2IS511, transposase OrfB. (302 aa)
AKQ40855.1Type I restriction-modification system endonuclease, putative. (1077 aa)
AKQ40856.1Putative type I site-specific restriction-modification system, S subunit. (426 aa)
AKQ40857.1Type I restriction-modification system DNA methylase, putative. (680 aa)
AKQ40858.2Hypothetical protein. (50 aa)
AKQ40859.2Hypothetical protein. (1975 aa)
AKQ40866.1Hypothetical protein. (974 aa)
AKQ40869.2Single-stranded DNA-binding protein. (156 aa)
AKQ40876.1Metallophosphoesterase. (370 aa)
AKQ40879.2Transposase. (143 aa)
AKQ43016.2Transposase. (117 aa)
AKQ40886.2Hypothetical protein. (271 aa)
AKQ40888.2Symbiosis island integrase; Belongs to the 'phage' integrase family. (433 aa)
AKQ40896.2IS511, transposase OrfB. (302 aa)
AKQ40897.2Hypothetical protein. (88 aa)
ruvCCrossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (154 aa)
AKQ43024.2Hypothetical protein. (219 aa)
AKQ40916.1Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (351 aa)
AKQ40920.1Ribonucleotide-diphosphate reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (698 aa)
gyrBType IIA topoisomerase B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (848 aa)
AKQ40961.1Exodeoxyribonuclease III. (265 aa)
AKQ40964.1ATP-dependent DNA helicase RecQ. (598 aa)
unguracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (227 aa)
AKQ41003.1DNA polymerase III delta subunit. (344 aa)
AKQ43052.1Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (93 aa)
AKQ43056.2Hypothetical protein. (409 aa)
AKQ41034.1ISCc3, transposase OrfA. (124 aa)
xseAExodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (482 aa)
AKQ41088.1Exodeoxyribonuclease III. (257 aa)
dnaQDNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (228 aa)
AKQ41122.1ATP-dependent DNA ligase. (536 aa)
AKQ41172.1Integrase; Belongs to the 'phage' integrase family. (410 aa)
mutSDNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (873 aa)
polADNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (944 aa)
AKQ41315.1Hypothetical protein. (337 aa)
AKQ41360.2Transposase. (81 aa)
AKQ41361.2Hypothetical protein. (69 aa)
AKQ43141.2Transposase. (117 aa)
AKQ41363.2Transposase orfA IS5 family element. (90 aa)
AKQ41375.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (507 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (216 aa)
dnaAChromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (486 aa)
mutM5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (271 aa)
ruvAHolliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (200 aa)
ruvBHolliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (342 aa)
AKQ43196.2Phage-related integrase. (438 aa)
AKQ41518.1Hypothetical protein. (301 aa)
AKQ41530.1Single-stranded DNA-binding protein. (136 aa)
AKQ41537.1Chromosome segregation protein SMC. (834 aa)
AKQ41539.1Single-stranded DNA-binding protein. (132 aa)
AKQ43200.2Transposase. (117 aa)
AKQ41545.1TrwC protein. (969 aa)
AKQ41547.2Hypothetical protein. (2160 aa)
AKQ41580.1ISCc3, transposase OrfA. (124 aa)
AKQ41582.1ISCc3, transposase OrfB. (326 aa)
AKQ41583.1ISCc3, transposase OrfA. (124 aa)
AKQ41589.1ISCc3, transposase OrfA. (124 aa)
AKQ41594.2Hypothetical protein. (69 aa)
AKQ41595.2Transposase. (143 aa)
AKQ41596.1Transposase. (143 aa)
AKQ41597.1Transposase. (102 aa)
AKQ41607.1Transposase. (296 aa)
AKQ41608.1Transposase IS116/IS110/IS902 family protein. (350 aa)
AKQ41609.1ISCc3, transposase OrfB. (326 aa)
AKQ41610.1ISCc3, transposase OrfA. (124 aa)
AKQ41640.1ISCc3, transposase OrfA. (124 aa)
AKQ41645.1Transposase, IS4 family. (275 aa)
AKQ43212.1Transposase IS4. (112 aa)
AKQ41657.1Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J. (326 aa)
AKQ41658.1Transposase IS3/IS911 family protein. (127 aa)
AKQ41673.1Hypothetical protein. (174 aa)
AKQ41701.1S1/P1 Nuclease. (285 aa)
AKQ41730.1Hypothetical protein. (315 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (728 aa)
smcChromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1140 aa)
AKQ41791.2A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. (343 aa)
AKQ41822.1Hypothetical protein; Involved in DNA repair and RecF pathway recombination. (199 aa)
AKQ43252.2Magnesium transporter ApaG. (159 aa)
AKQ41831.2Hypothetical protein. (88 aa)
AKQ41832.2IS511, transposase OrfB. (302 aa)
AKQ43254.2Transposase. (117 aa)
AKQ41884.2IS511, transposase OrfB. (302 aa)
AKQ41885.1Transposase IS116/IS110/IS902 family protein. (350 aa)
AKQ41886.2Hypothetical protein. (88 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (971 aa)
recARecombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (355 aa)
AKQ41929.1Multidrug transporter. (269 aa)
AKQ43282.2DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (394 aa)
AKQ41979.2DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (568 aa)
ligANAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. (685 aa)
AKQ42029.1Hypothetical protein. (256 aa)
AKQ42030.2Hypothetical protein. (531 aa)
dnaXDNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (621 aa)
topADNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (861 aa)
xerCTyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (293 aa)
AKQ42137.1Mutator mutT protein, hypothetical. (136 aa)
AKQ42151.1ATP-dependent exonuclease V subunit beta; Belongs to the helicase family. UvrD subfamily. (1158 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1164 aa)
AKQ42164.2DNA polymerase III subunit alpha. (1162 aa)
AKQ42166.1Hypothetical protein. (364 aa)
lexALexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (221 aa)
gyrADNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (948 aa)
parEDNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (663 aa)
AKQ42273.1Phage integrase; Belongs to the 'phage' integrase family. (299 aa)
dnaJDnaJ molecular chaperone; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] (371 aa)
radAPutative ATP-dependent serine protease; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (455 aa)
AKQ42298.1DNA polymerase III subunit delta'. (319 aa)
AKQ42300.1LuxR family transcriptional regulator. (262 aa)
AKQ42309.1Putative transposase for insertion sequence element. (325 aa)
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (613 aa)
AKQ42338.2Hypothetical protein. (88 aa)
AKQ42339.1Transposase IS116/IS110/IS902 family protein. (350 aa)
AKQ42340.2IS511, transposase OrfB. (302 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (631 aa)
xseBExodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (86 aa)
AKQ42374.1Single-stranded DNA-specific exonuclease. (593 aa)
dnaE2DNA polymerase III subunit alpha; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. (1184 aa)
AKQ42384.1Uracil-DNA glycosylase: Phage SPO1 DNA polymerase-related protein. (483 aa)
AKQ42385.1Hypothetical protein. (414 aa)
AKQ42395.1Prolyl 4-hydroxylase, alpha subunit. (227 aa)
AKQ43383.2Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (80 aa)
priAPrimosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (714 aa)
AKQ42413.2Putative ada regulatory of adaptative response protein. (342 aa)
AKQ43390.2Modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (379 aa)
parCDNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (765 aa)
AKQ42464.1DNA recombination protein. (462 aa)
recRRecombinational DNA repair protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (205 aa)
AKQ42473.2DnaJ-class molecular chaperone. (145 aa)
uvrCExcinuclease complex nuclease subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (647 aa)
AKQ42503.1ATPase. (201 aa)
AKQ42509.1DNA polymerase III, chi subunit. (145 aa)
AKQ42530.2Hypothetical protein. (138 aa)
AKQ42531.1Hypothetical protein. (88 aa)
AKQ42532.2IS511, transposase OrfB. (302 aa)
AKQ42539.2Transposase; Belongs to the 'phage' integrase family. (399 aa)
tdkThymidine kinase. (193 aa)
AKQ42572.1Hypothetical protein. (141 aa)
AKQ43416.2Uracil-DNA glycosylase superfamily. (154 aa)
recFRecombinational DNA repair ATPase; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. (365 aa)
AKQ42594.1ATPase AAA. (442 aa)
AKQ42627.1Putative DNA-3-methyladenine glycosidase II protein. (205 aa)
AKQ42725.1DnaJ-class molecular chaperone. (176 aa)
AKQ42746.1Hypothetical protein. (83 aa)
AKQ42755.1Hypothetical protein. (351 aa)
dinBDNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (378 aa)
AKQ42770.1Hypothetical protein. (841 aa)
kuHypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (276 aa)
AKQ42773.2Hypothetical protein. (79 aa)
AKQ42775.1Hypothetical protein. (88 aa)
AKQ42776.2IS511, transposase OrfB. (302 aa)
AKQ42785.2Symbiosis island integrase; Belongs to the 'phage' integrase family. (380 aa)
AKQ42808.1Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. (172 aa)
AKQ43472.2Integrase; Belongs to the 'phage' integrase family. (364 aa)
AKQ42819.1Putative RNA-directed DNA polymerase. (313 aa)
AKQ42821.1Hypothetical protein. (88 aa)
AKQ42822.2IS511, transposase OrfB. (302 aa)
AKQ42824.1IncW plasmid conjugative relaxase protein TrwC. (979 aa)
AKQ42828.1Hypothetical protein. (89 aa)
AKQ42829.1Hypothetical protein. (1210 aa)
AKQ42934.2Transposase. (58 aa)
AKQ42954.2IS511, transposase OrfB. (302 aa)
AKQ42955.2Hypothetical protein. (75 aa)
ANC50362.1Transposase. (131 aa)
ANC50378.1Transposase. (79 aa)
ANC50445.1ATPase. (856 aa)
ANC50485.1Heat shock protein DnaJ domain-containing protein. (153 aa)
ANC50508.1Hypothetical protein. (547 aa)
ANC50549.1Integrase catalytic subunit. (123 aa)
Your Current Organism:
Erythrobacter atlanticus
NCBI taxonomy Id: 1648404
Other names: E. atlanticus, Erythrobacter atlanticus Zhuang et al. 2015, Erythrobacter sp. s21-N3, KCTC 42697, MCCC 1A00519, strain s21-N3
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