STRINGSTRING
AKQ42834.2 AKQ42834.2 AKQ40936.1 AKQ40936.1 pyrD pyrD AKQ41100.1 AKQ41100.1 AKQ41136.1 AKQ41136.1 AKQ41199.1 AKQ41199.1 AKQ41319.1 AKQ41319.1 dapB dapB AKQ42897.1 AKQ42897.1 AKQ41622.2 AKQ41622.2 AKQ41723.1 AKQ41723.1 AKQ41750.1 AKQ41750.1 AKQ41924.1 AKQ41924.1 AKQ43484.2 AKQ43484.2 AKQ43286.2 AKQ43286.2 AKQ41985.1 AKQ41985.1 AKQ42000.1 AKQ42000.1 AKQ42028.1 AKQ42028.1 AKQ42088.1 AKQ42088.1 AKQ42102.1 AKQ42102.1 AKQ42190.1 AKQ42190.1 AKQ42274.1 AKQ42274.1 AKQ42307.1 AKQ42307.1 AKQ42601.1 AKQ42601.1 AKQ42709.1 AKQ42709.1 AKQ43444.2 AKQ43444.2 AKQ42718.2 AKQ42718.2 AKQ42787.1 AKQ42787.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKQ42834.2Coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (449 aa)
AKQ40936.1isovaleryl-CoA dehydrogenase. (388 aa)
pyrDDihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (387 aa)
AKQ41100.1Hypothetical protein. (147 aa)
AKQ41136.1Enoyl-(acyl-carrier-protein) reductase NADH. (267 aa)
AKQ41199.1Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein. (186 aa)
AKQ41319.1Cyclohexadienyl dehydrogenase. (302 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (243 aa)
AKQ42897.1uroporphyrinogen-III C-methyltransferase. (264 aa)
AKQ41622.2Acyl-CoA dehydrogenase. (537 aa)
AKQ41723.1Putative glutaryl-CoA dehydrogenase protein. (394 aa)
AKQ41750.1Siroheme synthase. (262 aa)
AKQ41924.1acyl-CoA dehydrogenase domain-containing protein. (596 aa)
AKQ43484.2Succinate dehydrogenase. (116 aa)
AKQ43286.2Succinate dehydrogenase, cytochrome b subunit. (150 aa)
AKQ41985.1Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (614 aa)
AKQ42000.1Ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (422 aa)
AKQ42028.1General stress protein. (156 aa)
AKQ42088.12-methylthioadenine synthase. (399 aa)
AKQ42102.1acyl-CoA dehydrogenase. (597 aa)
AKQ42190.1Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (261 aa)
AKQ42274.1Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (383 aa)
AKQ42307.1tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (340 aa)
AKQ42601.1uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. (251 aa)
AKQ42709.1acyl-CoA dehydrogenase. (388 aa)
AKQ43444.2Putative acyl-CoA dehydrogenase. (410 aa)
AKQ42718.2Coproporphyrinogen III oxidase. (284 aa)
AKQ42787.1acyl-CoA dehydrogenase. (381 aa)
Your Current Organism:
Erythrobacter atlanticus
NCBI taxonomy Id: 1648404
Other names: E. atlanticus, Erythrobacter atlanticus Zhuang et al. 2015, Erythrobacter sp. s21-N3, KCTC 42697, MCCC 1A00519, strain s21-N3
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