STRINGSTRING
AKQ42977.1 AKQ42977.1 AKQ41061.1 AKQ41061.1 AKQ43072.1 AKQ43072.1 AKQ41279.1 AKQ41279.1 AKQ43129.2 AKQ43129.2 ftsH ftsH AKQ41375.1 AKQ41375.1 ruvA ruvA ruvB ruvB AKQ41426.2 AKQ41426.2 AKQ41457.1 AKQ41457.1 AKQ41537.1 AKQ41537.1 ANC50445.1 ANC50445.1 AKQ41600.1 AKQ41600.1 AKQ41623.1 AKQ41623.1 AKQ41649.1 AKQ41649.1 AKQ41653.1 AKQ41653.1 uvrB uvrB smc smc uvrA uvrA AKQ43271.2 AKQ43271.2 lon lon AKQ42189.2 AKQ42189.2 ychF ychF mutL mutL AKQ42390.1 AKQ42390.1 AKQ43401.2 AKQ43401.2 AKQ42594.1 AKQ42594.1 AKQ42660.1 AKQ42660.1 clpB clpB AKQ42672.2 AKQ42672.2 clpX clpX AKQ42793.1 AKQ42793.1 AKQ42803.1 AKQ42803.1 AKQ42972.2 AKQ42972.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKQ42977.1Copper/silver efflux P-type ATPase. (744 aa)
AKQ41061.1Metal-sulfur cluster biosynthesis protein. (174 aa)
AKQ43072.1ATP-dependent Clp protease ATP-binding protein; Belongs to the ClpA/ClpB family. (796 aa)
AKQ41279.1Cell division cycle protein; Belongs to the AAA ATPase family. (768 aa)
AKQ43129.2Chromosome partitioning protein ParA; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (333 aa)
ftsHATP-dependent metalloprotease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (648 aa)
AKQ41375.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (507 aa)
ruvAHolliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (200 aa)
ruvBHolliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (342 aa)
AKQ41426.2Magnesium chelatase. (320 aa)
AKQ41457.1ATPase FliI/YscN family. (445 aa)
AKQ41537.1Chromosome segregation protein SMC. (834 aa)
ANC50445.1ATPase. (856 aa)
AKQ41600.1HAD ATPase, P-type, family IC. (885 aa)
AKQ41623.1Copper-translocating P-type ATPase. (803 aa)
AKQ41649.1Haloacid dehalogenase. (736 aa)
AKQ41653.1Copper/silver efflux P-type ATPase. (787 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (728 aa)
smcChromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1140 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (971 aa)
AKQ43271.2DNA and RNA helicase. (781 aa)
lonATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (813 aa)
AKQ42189.2Hypothetical protein. (355 aa)
ychFGTP-dependent nucleic acid-binding protein EngD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (366 aa)
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (613 aa)
AKQ42390.1Fused predicted transporter subunit of ABC superfamily: ATP-binding component. (557 aa)
AKQ43401.2Aerobic cobaltochelatase subunit CobS. (329 aa)
AKQ42594.1ATPase AAA. (442 aa)
AKQ42660.1Pilus assembly protein CpaE. (434 aa)
clpBATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (859 aa)
AKQ42672.2Hypothetical protein. (579 aa)
clpXATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (423 aa)
AKQ42793.1E1-E2 type cation ATPase. (705 aa)
AKQ42803.1ATP-dependent protease; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. (432 aa)
AKQ42972.2Cation-transporting ATPase. (849 aa)
Your Current Organism:
Erythrobacter atlanticus
NCBI taxonomy Id: 1648404
Other names: E. atlanticus, Erythrobacter atlanticus Zhuang et al. 2015, Erythrobacter sp. s21-N3, KCTC 42697, MCCC 1A00519, strain s21-N3
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