Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKQ41003.1 | AKQ42298.1 | CP97_01475 | CP97_10115 | DNA polymerase III delta subunit. | DNA polymerase III subunit delta'. | 0.981 |
| AKQ41003.1 | AKQ42509.1 | CP97_01475 | CP97_11430 | DNA polymerase III delta subunit. | DNA polymerase III, chi subunit. | 0.977 |
| AKQ41003.1 | AKQ43282.2 | CP97_01475 | CP97_07915 | DNA polymerase III delta subunit. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.992 |
| AKQ41003.1 | dnaX | CP97_01475 | CP97_08505 | DNA polymerase III delta subunit. | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.974 |
| AKQ41267.1 | rpoA | CP97_03245 | CP97_07240 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.911 |
| AKQ41267.1 | rpoB | CP97_03245 | CP97_03450 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.910 |
| AKQ41267.1 | rpoC | CP97_03245 | CP97_03455 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.918 |
| AKQ41267.1 | rpoZ | CP97_03245 | CP97_03985 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.806 |
| AKQ41368.2 | cysC | CP97_03945 | CP97_03940 | Sulfate adenylyltransferase subunit 2. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.999 |
| AKQ41518.1 | dnaG | CP97_05035 | CP97_10400 | Hypothetical protein. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.553 |
| AKQ42298.1 | AKQ41003.1 | CP97_10115 | CP97_01475 | DNA polymerase III subunit delta'. | DNA polymerase III delta subunit. | 0.981 |
| AKQ42298.1 | AKQ42509.1 | CP97_10115 | CP97_11430 | DNA polymerase III subunit delta'. | DNA polymerase III, chi subunit. | 0.974 |
| AKQ42298.1 | AKQ43282.2 | CP97_10115 | CP97_07915 | DNA polymerase III subunit delta'. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.974 |
| AKQ42298.1 | dnaG | CP97_10115 | CP97_10400 | DNA polymerase III subunit delta'. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.491 |
| AKQ42298.1 | dnaX | CP97_10115 | CP97_08505 | DNA polymerase III subunit delta'. | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.925 |
| AKQ42509.1 | AKQ41003.1 | CP97_11430 | CP97_01475 | DNA polymerase III, chi subunit. | DNA polymerase III delta subunit. | 0.977 |
| AKQ42509.1 | AKQ42298.1 | CP97_11430 | CP97_10115 | DNA polymerase III, chi subunit. | DNA polymerase III subunit delta'. | 0.974 |
| AKQ42509.1 | AKQ43282.2 | CP97_11430 | CP97_07915 | DNA polymerase III, chi subunit. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.960 |
| AKQ42509.1 | dnaX | CP97_11430 | CP97_08505 | DNA polymerase III, chi subunit. | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.970 |
| AKQ43282.2 | AKQ41003.1 | CP97_07915 | CP97_01475 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III delta subunit. | 0.992 |
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