Your Input: | |
| | AKQ43018.1 | Plasmid partitioning protein ParB. (656 aa) |
| | AKQ40886.2 | Hypothetical protein. (271 aa) |
| | AKQ40910.1 | Peptidase S16, lon-like protein. (204 aa) |
| | rpmG | 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (55 aa) |
| | AKQ40963.1 | Hypothetical protein. (87 aa) |
| | AKQ40964.1 | ATP-dependent DNA helicase RecQ. (598 aa) |
| | AKQ40973.2 | Hypothetical protein. (521 aa) |
| | AKQ43052.1 | Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (93 aa) |
| | AKQ41038.2 | Hypothetical protein. (279 aa) |
| | AKQ41047.1 | Hypothetical protein. (378 aa) |
| | rpmB | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (96 aa) |
| | rplM | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (159 aa) |
| | ANC50382.1 | Hypothetical protein. (308 aa) |
| | hpf | Ribosome-associated protein Y; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (189 aa) |
| | dnaQ | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (228 aa) |
| | AKQ41108.1 | Chromosome partitioning protein ParB; Belongs to the ParB family. (329 aa) |
| | AKQ43070.2 | ATP-dependent helicase. (894 aa) |
| | AKQ41180.1 | Hypothetical protein. (270 aa) |
| | rpmI | 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (67 aa) |
| | kynU | Kynureninase, putative; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (408 aa) |
| | AKQ41236.1 | cob(I)yrinic acid a, c-diamide adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (191 aa) |
| | AKQ41253.1 | Hypothetical protein. (463 aa) |
| | rplL | 50S ribosomal protein L7; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (124 aa) |
| | rplJ | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (182 aa) |
| | AKQ41315.1 | Hypothetical protein. (337 aa) |
| | AKQ41375.1 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (507 aa) |
| | rpmJ | 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (51 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (216 aa) |
| | cobB | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. (230 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (486 aa) |
| | rpsT | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (86 aa) |
| | edd | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (609 aa) |
| | AKQ43195.2 | Sulfotransferase. (436 aa) |
| | AKQ41518.1 | Hypothetical protein. (301 aa) |
| | AKQ41524.1 | Plasmid partitioning protein ParB. (664 aa) |
| | AKQ41545.1 | TrwC protein. (969 aa) |
| | AKQ41547.2 | Hypothetical protein. (2160 aa) |
| | edd-2 | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (604 aa) |
| | AKQ43214.2 | Hypothetical protein. (499 aa) |
| | rplU | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (148 aa) |
| | AKQ41773.2 | 50S ribosomal protein L27. (67 aa) |
| | smc | Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1140 aa) |
| | AKQ42503.1 | ATPase. (201 aa) |
| | AKQ43401.2 | Aerobic cobaltochelatase subunit CobS. (329 aa) |
| | recR | Recombinational DNA repair protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (205 aa) |
| | AKQ43390.2 | Modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (379 aa) |
| | priA | Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (714 aa) |
| | AKQ43383.2 | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (80 aa) |
| | rpsD | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (190 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (631 aa) |
| | AKQ42315.2 | Hypothetical protein. (244 aa) |
| | rplY | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (230 aa) |
| | AKQ42247.1 | Hypothetical protein. (421 aa) |
| | AKQ42226.1 | Hypothetical protein. (122 aa) |
| | AKQ42183.2 | Lipopolysaccharide biosynthesis protein. (492 aa) |
| | AKQ42180.1 | AMP-binding domain-containing protein. (500 aa) |
| | AKQ42172.1 | N-formylglutamate amidohydrolase. (242 aa) |
| | AKQ42148.1 | Aminoglycoside phosphotransferase. (330 aa) |
| | AKQ42126.1 | DEAD/DEAH box helicase. (458 aa) |
| | AKQ42108.1 | Circadian clock protein KaiC. (499 aa) |
| | AKQ42076.2 | Aldehyde-activating protein. (124 aa) |
| | AKQ42074.1 | 50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. (76 aa) |
| | rpsB | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (294 aa) |
| | AKQ42055.1 | Histone-like DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa) |
| | AKQ42053.2 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (114 aa) |
| | AKQ42044.1 | Hypothetical protein. (426 aa) |
| | AKQ42034.1 | Aldehyde-activating protein. (143 aa) |
| | AKQ43295.2 | 2-oxoisovalerate dehydrogenase (beta subunit). (353 aa) |
| | AKQ41993.1 | TPR repeat-containing protein. (181 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (483 aa) |
| | AKQ41979.2 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (568 aa) |
| | AKQ43284.2 | Hypothetical protein. (563 aa) |
| | rpsF | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (115 aa) |
| | rpsR | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (54 aa) |
| | rplI | 50S ribosomal protein L9; Binds to the 23S rRNA. (209 aa) |
| | rpsP | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (205 aa) |
| | AKQ41949.1 | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (574 aa) |
| | AKQ41942.1 | Hypothetical protein; Belongs to the UPF0758 family. (239 aa) |
| | AKQ41932.1 | DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. (474 aa) |
| | AKQ41867.2 | 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (120 aa) |
| | rpsK | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa) |
| | rplO | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (177 aa) |
| | rpmD | 50S ribosomal protein L30. (61 aa) |
| | rpsE | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (269 aa) |
| | AKQ41857.2 | 50S ribosomal protein L18. (85 aa) |
| | rplF | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa) |
| | rpsH | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (131 aa) |
| | rpsN | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rplE | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (194 aa) |
| | rplX | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (106 aa) |
| | rplN | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rpsQ | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (99 aa) |
| | rpmC | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (70 aa) |
| | rplP | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (145 aa) |
| | rpsC | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (231 aa) |
| | rplV | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (125 aa) |
| | rpsS | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (91 aa) |
| | rplB | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (278 aa) |
| | rplW | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (103 aa) |
| | rplD | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (207 aa) |
| | rplC | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (294 aa) |
| | rpsJ | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | rpsG | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | AKQ41822.1 | Hypothetical protein; Involved in DNA repair and RecF pathway recombination. (199 aa) |
| | AKQ41805.2 | MucR family transcriptional regulator. (135 aa) |
| | ANC50542.1 | Hypothetical protein; Belongs to the small heat shock protein (HSP20) family. (163 aa) |
| | ANC50508.1 | Hypothetical protein. (547 aa) |
| | ANC50502.1 | Hypothetical protein. (181 aa) |
| | ANC50493.1 | Hypothetical protein. (58 aa) |
| | rpsI | 30S ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. (179 aa) |
| | ANC50342.1 | Hypothetical protein. (678 aa) |
| | rpmH | 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | ANC50332.1 | Hypothetical protein. (277 aa) |
| | AKQ42824.1 | IncW plasmid conjugative relaxase protein TrwC. (979 aa) |
| | AKQ42811.1 | Hypothetical protein. (206 aa) |
| | AKQ42761.2 | Phytoene dehydrogenase. (488 aa) |
| | AKQ43454.2 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. (229 aa) |
| | AKQ42746.1 | Hypothetical protein. (83 aa) |
| | AKQ42728.1 | Hypothetical protein. (273 aa) |
| | AKQ43439.2 | Aldehyde-activating protein. (165 aa) |
| | rpsU | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (68 aa) |
| | AKQ43423.2 | Hypothetical protein. (536 aa) |
| | AKQ42594.1 | ATPase AAA. (442 aa) |
| | recF | Recombinational DNA repair ATPase; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. (365 aa) |
| | AKQ42580.1 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. (205 aa) |
| | infB | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (854 aa) |
| | rpsO | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa) |
| | AKQ43409.2 | Hypothetical protein. (288 aa) |
| | AKQ42507.1 | Sulfotransferase. (405 aa) |
| | AKQ40861.1 | Hypothetical protein. (1243 aa) |
| | AKQ40866.1 | Hypothetical protein. (974 aa) |
