STRINGSTRING
AKQ41084.2 AKQ41084.2 AKQ41241.1 AKQ41241.1 AKQ41339.1 AKQ41339.1 AKQ41598.1 AKQ41598.1 AKQ41719.2 AKQ41719.2 AKQ42140.1 AKQ42140.1 AKQ42958.1 AKQ42958.1 AKQ43497.2 AKQ43497.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKQ41084.2Membrane protein. (480 aa)
AKQ41241.1Putative outer membrane efflux protein OprN precursor. (486 aa)
AKQ41339.1Hypothetical protein. (456 aa)
AKQ41598.1Hypothetical protein. (476 aa)
AKQ41719.2RND efflux system outer membrane lipoprotein NodT. (508 aa)
AKQ42140.1RND transporter. (483 aa)
AKQ42958.1Hypothetical protein. (473 aa)
AKQ43497.2Hypothetical protein. (465 aa)
Your Current Organism:
Erythrobacter atlanticus
NCBI taxonomy Id: 1648404
Other names: E. atlanticus, Erythrobacter atlanticus Zhuang et al. 2015, Erythrobacter sp. s21-N3, KCTC 42697, MCCC 1A00519, strain s21-N3
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