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THC_0203 THC_0203 glmS glmS THC_0626 THC_0626 THC_0861 THC_0861 argH argH THC_0948 THC_0948 pyrB pyrB purF purF THC_1187 THC_1187 THC_1199 THC_1199 argG argG carA carA THC_1363 THC_1363 THC_1557 THC_1557 THC_1748 THC_1748 THC_1774 THC_1774 carB carB purA purA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
THC_0203Phosphoribosylformylglycinamidine synthase. (270 aa)
glmSGlutamine amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (612 aa)
THC_0626Aminotransferase. (403 aa)
THC_0861L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (533 aa)
argHArgininosuccinate lyase. (462 aa)
THC_0948Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (440 aa)
pyrBAspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (309 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (459 aa)
THC_1187Asparagine synthase. (635 aa)
THC_1199Asparagine synthase. (392 aa)
argGArgininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (396 aa)
carACarbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. (380 aa)
THC_1363Glutamine synthetase. (444 aa)
THC_1557Hypothetical protein. (513 aa)
THC_1748Aspartate aminotransferase. (399 aa)
THC_1774Aspartate aminotransferase. (395 aa)
carBCarbamoyl phosphate synthase large subunit; Belongs to the CarB family. (1085 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (430 aa)
Your Current Organism:
Caldimicrobium thiodismutans
NCBI taxonomy Id: 1653476
Other names: C. thiodismutans, Caldimicrobium thiodismutans Kojima et al. 2016, DSM 29380, NBRC 110713, Thermodesulfobacteriaceae bacterium TF1, strain TF1
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