STRINGSTRING
kdgK_2 kdgK_2 por por gutB_2 gutB_2 deoR_2 deoR_2 sugC_4 sugC_4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kdgK_22-dehydro-3-deoxygluconokinase. (306 aa)
porPolyol:NADP oxidoreductase. (496 aa)
gutB_2Sorbitol dehydrogenase. (340 aa)
deoR_2Deoxyribonucleoside regulator. (330 aa)
sugC_4Trehalose import ATP-binding protein SugC. (370 aa)
Your Current Organism:
Rhodococcus sp. PBTS1
NCBI taxonomy Id: 1653478
Other names: R. sp. PBTS 1, Rhodococcus sp. PBTS 1
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