STRINGSTRING
AMY18840.1 AMY18840.1 csp csp AMY20118.1 AMY20118.1 yccF yccF pimE_2 pimE_2 rpfA rpfA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMY18840.1Hypothetical protein. (93 aa)
cspCold shock-like protein. (142 aa)
AMY20118.1Hypothetical protein. (69 aa)
yccFInner membrane protein YccF. (143 aa)
pimE_2Alpha-1,2-mannosyltransferase; Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase. (452 aa)
rpfAResuscitation-promoting factor RpfA. (197 aa)
Your Current Organism:
Rhodococcus sp. PBTS1
NCBI taxonomy Id: 1653478
Other names: R. sp. PBTS 1, Rhodococcus sp. PBTS 1
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