STRINGSTRING
lpqY lpqY ugpB ugpB AMY21320.1 AMY21320.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lpqYTrehalose-binding lipoprotein LpqY. (457 aa)
ugpBSn-glycerol-3-phosphate-binding periplasmic protein UgpB. (442 aa)
AMY21320.1Putative ABC transporter-binding protein. (449 aa)
Your Current Organism:
Rhodococcus sp. PBTS1
NCBI taxonomy Id: 1653478
Other names: R. sp. PBTS 1, Rhodococcus sp. PBTS 1
Server load: low (16%) [HD]