STRINGSTRING
kpsD kpsD kpsE kpsE kpsT kpsT kpsM kpsM kpsS kpsS kpsC kpsC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kpsDCapsular polysaccharide export system, periplasmic protein; Pfam matches to PF02563.12 Poly_export, and to PF10531.5 SLBB, and to PF06251.7 Caps_synth_GfcC. (549 aa)
kpsECapsular polysaccharide export system, inner membrane protein; Pfam match to PF02706.11 Wzz. (380 aa)
kpsTCapsular polysaccharide export system, ATP-binding protein; Pfam match to PF00005.23 ABC_tran. (221 aa)
kpsMCapsular polysaccharide export system, inner membrane protein; Pfam match to PF01061.20 ABC2_membrane. (260 aa)
kpsSCapsular polysaccharide export protein; Pfam match to PF05159.10 Capsule_synth. (398 aa)
kpsCCapsular polysaccharide export protein (two domain); Pfam matches to PF05159.10 Capsule_synth, and to PF05159.10 Capsule_synth. (755 aa)
Your Current Organism:
Campylobacter sp. RM6137
NCBI taxonomy Id: 1660073
Other names: C. sp. RM6137
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