(6 nodes) Pyrimidine biosynthesis network (Magnetospirillum sp. XM1)

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second shell of interactors

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proteins of unknown 3D structure

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Your Input:
	pyrD	Dihydro-orotate oxidase, FMN-linked（Aldolase-type TIM barrel,5-351） Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (355 aa)
	pyrB	Aspartate carbamoyltransferase(Aspartate/ornithine carbamoyltransferase,3-313); Function of strongly homologous gene; enzyme; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (317 aa)
	pyrC	Dihydroorotase(Dihydroorotase,26-433); Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. (436 aa)
	XM1_1895	Putative dihydroorotase(Dihydroorotase,21-426); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (443 aa)
	carB	Carbamoyl-phosphate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarB family. (1085 aa)
	carA	Carbamoyl phosphate synthetase small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarA family. (406 aa)

Your Current Organism:

Magnetospirillum sp. XM1

NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
XM1_1895	carA	XM1_1895	XM1_4694	Putative dihydroorotase(Dihydroorotase,21-426); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Carbamoyl phosphate synthetase small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarA family.	0.989
XM1_1895	carB	XM1_1895	XM1_4693	Putative dihydroorotase(Dihydroorotase,21-426); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Carbamoyl-phosphate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarB family.	0.978
XM1_1895	pyrB	XM1_1895	XM1_1851	Putative dihydroorotase(Dihydroorotase,21-426); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Aspartate carbamoyltransferase(Aspartate/ornithine carbamoyltransferase,3-313); Function of strongly homologous gene; enzyme; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.999
XM1_1895	pyrC	XM1_1895	XM1_1852	Putative dihydroorotase(Dihydroorotase,21-426); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Dihydroorotase(Dihydroorotase,26-433); Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.	0.924
XM1_1895	pyrD	XM1_1895	XM1_1472	Putative dihydroorotase(Dihydroorotase,21-426); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Dihydro-orotate oxidase, FMN-linked（Aldolase-type TIM barrel,5-351） Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.978
carA	XM1_1895	XM1_4694	XM1_1895	Carbamoyl phosphate synthetase small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarA family.	Putative dihydroorotase(Dihydroorotase,21-426); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.989
carA	carB	XM1_4694	XM1_4693	Carbamoyl phosphate synthetase small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarA family.	Carbamoyl-phosphate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarB family.	0.999
carA	pyrB	XM1_4694	XM1_1851	Carbamoyl phosphate synthetase small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarA family.	Aspartate carbamoyltransferase(Aspartate/ornithine carbamoyltransferase,3-313); Function of strongly homologous gene; enzyme; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.999
carA	pyrC	XM1_4694	XM1_1852	Carbamoyl phosphate synthetase small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarA family.	Dihydroorotase(Dihydroorotase,26-433); Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.	0.991
carA	pyrD	XM1_4694	XM1_1472	Carbamoyl phosphate synthetase small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarA family.	Dihydro-orotate oxidase, FMN-linked（Aldolase-type TIM barrel,5-351） Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.923
carB	XM1_1895	XM1_4693	XM1_1895	Carbamoyl-phosphate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarB family.	Putative dihydroorotase(Dihydroorotase,21-426); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.978
carB	carA	XM1_4693	XM1_4694	Carbamoyl-phosphate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarB family.	Carbamoyl phosphate synthetase small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarA family.	0.999
carB	pyrB	XM1_4693	XM1_1851	Carbamoyl-phosphate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarB family.	Aspartate carbamoyltransferase(Aspartate/ornithine carbamoyltransferase,3-313); Function of strongly homologous gene; enzyme; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.999
carB	pyrC	XM1_4693	XM1_1852	Carbamoyl-phosphate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarB family.	Dihydroorotase(Dihydroorotase,26-433); Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.	0.981
carB	pyrD	XM1_4693	XM1_1472	Carbamoyl-phosphate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarB family.	Dihydro-orotate oxidase, FMN-linked（Aldolase-type TIM barrel,5-351） Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.843
pyrB	XM1_1895	XM1_1851	XM1_1895	Aspartate carbamoyltransferase(Aspartate/ornithine carbamoyltransferase,3-313); Function of strongly homologous gene; enzyme; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	Putative dihydroorotase(Dihydroorotase,21-426); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.999
pyrB	carA	XM1_1851	XM1_4694	Aspartate carbamoyltransferase(Aspartate/ornithine carbamoyltransferase,3-313); Function of strongly homologous gene; enzyme; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	Carbamoyl phosphate synthetase small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarA family.	0.999
pyrB	carB	XM1_1851	XM1_4693	Aspartate carbamoyltransferase(Aspartate/ornithine carbamoyltransferase,3-313); Function of strongly homologous gene; enzyme; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	Carbamoyl-phosphate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarB family.	0.999
pyrB	pyrC	XM1_1851	XM1_1852	Aspartate carbamoyltransferase(Aspartate/ornithine carbamoyltransferase,3-313); Function of strongly homologous gene; enzyme; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	Dihydroorotase(Dihydroorotase,26-433); Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.	0.999
pyrB	pyrD	XM1_1851	XM1_1472	Aspartate carbamoyltransferase(Aspartate/ornithine carbamoyltransferase,3-313); Function of strongly homologous gene; enzyme; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	Dihydro-orotate oxidase, FMN-linked（Aldolase-type TIM barrel,5-351） Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.927