STRINGSTRING
trxA trxA yumC yumC XM1_4025 XM1_4025 ahpC ahpC ahpC-2 ahpC-2 trxB trxB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
trxAThioredoxin 1; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the thioredoxin family. (104 aa)
yumCFerredoxin--NADP reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (338 aa)
XM1_4025Protein of unknown function; No homology to any previously reported sequences. (165 aa)
ahpCAlkyl hydroperoxide reductase, C22 subunit, thioredoxin-like (detoxification of hydroperoxides); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa)
ahpC-2Alkyl hydroperoxide reductase, C22 subunit; Function of strongly homologous gene; enzyme. (207 aa)
trxBThioredoxin reductase, FAD/NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (316 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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