STRINGSTRING
mmgC mmgC ccr ccr XM1_1373 XM1_1373 XM1_1405 XM1_1405 XM1_1406 XM1_1406
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mmgC(2S)-methylsuccinyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (553 aa)
ccrCrotonyl-CoA reductase; Function of strongly homologous gene; enzyme. (418 aa)
XM1_1373Putative Citrate lyase beta subunit(Pyruvate/Phosphoenolpyruvate kinase,25-288); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the HpcH/HpaI aldolase family. (349 aa)
XM1_1405Putative Dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (358 aa)
XM1_1406Putative Citrate lyase beta subunit(Pyruvate/Phosphoenolpyruvate kinase,3-234); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the HpcH/HpaI aldolase family. (290 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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