STRINGSTRING
actP actP actP-3 actP-3 XM1_3532 XM1_3532 XM1_3961 XM1_3961 yjcH yjcH XM1_3963 XM1_3963
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
actPAcetate transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (554 aa)
actP-3Acetate transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (561 aa)
XM1_3532Putative inner membrane protein involved in acetate transport; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (111 aa)
XM1_3961Acetate transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (561 aa)
yjcHConserved hypothetical protein; Function of strongly homologous gene; putative membrane component. (111 aa)
XM1_3963Predicted signal-transduction protein containing cAMP-binding and CBS domains; Function of strongly homologous gene; putative receptor. (479 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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