STRINGSTRING
XM1_0443 XM1_0443 XM1_0488 XM1_0488 XM1_0499 XM1_0499 XM1_0709 XM1_0709 XM1_0710 XM1_0710 XM1_1623 XM1_1623 XM1_1624 XM1_1624 XM1_1625 XM1_1625 XM1_1637 XM1_1637 XM1_2807 XM1_2807 XM1_2825 XM1_2825 XM1_2960 XM1_2960
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XM1_0443Putative defective integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 'phage' integrase family. (442 aa)
XM1_0488Conserved protein of unknown function （Phage_integrase fragment） Homologs of previously reported genes of unknown function; Belongs to the 'phage' integrase family. (438 aa)
XM1_0499Integrase; Function of strongly homologous gene; enzyme. (188 aa)
XM1_0709Homologs of previously reported genes of unknown function. (108 aa)
XM1_0710Homologs of previously reported genes of unknown function. (151 aa)
XM1_1623Protein of unknown function (Integrase-like, catalytic core 264-462); No homology to any previously reported sequences. (529 aa)
XM1_1624Homologs of previously reported genes of unknown function. (108 aa)
XM1_1625Homologs of previously reported genes of unknown function. (151 aa)
XM1_1637Putative Integrase（ntegrase-like, catalytic core,5-186） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (189 aa)
XM1_2807Protein of unknown function (Integrase-like, catalytic core 244-428); No homology to any previously reported sequences. (532 aa)
XM1_2825Putative Integrase-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (193 aa)
XM1_2960Putative Integrase-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (161 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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