(11 nodes) Mixed, incl. Solute-binding protein family 5, and Nickel cation transmembrane transporter activity network (Magnetospirillum sp. XM1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	XM1_0531	Putative permease (drug-metabolite transporter DMT family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (296 aa)
	XM1_0532	Putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components, yejF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily. (533 aa)
	XM1_0533	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (342 aa)
	XM1_0534	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (367 aa)
	XM1_0535	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (591 aa)
	XM1_0536	Homologs of previously reported genes of unknown function. (215 aa)
	appC	Oligopeptide transport system permease protein AppC; Function of strongly homologous gene; transporter. (274 aa)
	XM1_2685	ABC-type dipeptide/oligopeptide/nickel transport system protein; Function of strongly homologous gene; transporter. (317 aa)
	XM1_2686	Putative ABC-type dipeptide transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (549 aa)
	XM1_2687	Homologs of previously reported genes of unknown function. (105 aa)
	XM1_2688	Homologs of previously reported genes of unknown function. (744 aa)

Your Current Organism:

Magnetospirillum sp. XM1

NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
XM1_0531	XM1_0532	XM1_0531	XM1_0532	Putative permease (drug-metabolite transporter DMT family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components, yejF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.	0.539
XM1_0531	XM1_0533	XM1_0531	XM1_0533	Putative permease (drug-metabolite transporter DMT family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.539
XM1_0531	XM1_0534	XM1_0531	XM1_0534	Putative permease (drug-metabolite transporter DMT family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.539
XM1_0531	XM1_0535	XM1_0531	XM1_0535	Putative permease (drug-metabolite transporter DMT family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.539
XM1_0531	XM1_0536	XM1_0531	XM1_0536	Putative permease (drug-metabolite transporter DMT family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Homologs of previously reported genes of unknown function.	0.459
XM1_0532	XM1_0531	XM1_0532	XM1_0531	Putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components, yejF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.	Putative permease (drug-metabolite transporter DMT family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.539
XM1_0532	XM1_0533	XM1_0532	XM1_0533	Putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components, yejF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.974
XM1_0532	XM1_0534	XM1_0532	XM1_0534	Putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components, yejF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.972
XM1_0532	XM1_0535	XM1_0532	XM1_0535	Putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components, yejF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.964
XM1_0532	XM1_0536	XM1_0532	XM1_0536	Putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components, yejF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.	Homologs of previously reported genes of unknown function.	0.649
XM1_0532	XM1_2685	XM1_0532	XM1_2685	Putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components, yejF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.	ABC-type dipeptide/oligopeptide/nickel transport system protein; Function of strongly homologous gene; transporter.	0.889
XM1_0532	XM1_2686	XM1_0532	XM1_2686	Putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components, yejF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.	Putative ABC-type dipeptide transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.456
XM1_0532	appC	XM1_0532	XM1_2684	Putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components, yejF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.	Oligopeptide transport system permease protein AppC; Function of strongly homologous gene; transporter.	0.985
XM1_0533	XM1_0531	XM1_0533	XM1_0531	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative permease (drug-metabolite transporter DMT family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.539
XM1_0533	XM1_0532	XM1_0533	XM1_0532	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components, yejF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.	0.974
XM1_0533	XM1_0534	XM1_0533	XM1_0534	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.982
XM1_0533	XM1_0535	XM1_0533	XM1_0535	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.968
XM1_0533	XM1_0536	XM1_0533	XM1_0536	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Homologs of previously reported genes of unknown function.	0.655
XM1_0533	XM1_2685	XM1_0533	XM1_2685	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	ABC-type dipeptide/oligopeptide/nickel transport system protein; Function of strongly homologous gene; transporter.	0.841
XM1_0533	XM1_2686	XM1_0533	XM1_2686	Putative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative ABC-type dipeptide transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.430