STRINGSTRING
XM1_0048 XM1_0048 XM1_0214 XM1_0214 XM1_0461 XM1_0461 XM1_2831 XM1_2831 XM1_2957 XM1_2957 XM1_3188 XM1_3188 XM1_4064 XM1_4064 XM1_4095 XM1_4095
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XM1_0048Conserved protein of unknown function (phage related); Homologs of previously reported genes of unknown function. (131 aa)
XM1_0214Conserved protein of unknown function (Peptidoglycan-binding lysin domain); Homologs of previously reported genes of unknown function. (313 aa)
XM1_0461Putative Site-specific DNA methylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (278 aa)
XM1_2831Protein of unknown function; No homology to any previously reported sequences. (264 aa)
XM1_2957Putative site-specific DNA methylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (276 aa)
XM1_3188PG_binding_1 domain-containing protein; Homologs of previously reported genes of unknown function. (287 aa)
XM1_4064Conserved protein of unknown function (DNA binding 12-129); Homologs of previously reported genes of unknown function. (139 aa)
XM1_4095D12 class N6 adenine-specific DNA methyltransferase; Function of strongly homologous gene; enzyme. (275 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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