STRINGSTRING
XM1_0189 XM1_0189 XM1_0196 XM1_0196 XM1_0197 XM1_0197 XM1_0650 XM1_0650 XM1_2580 XM1_2580 XM1_2581 XM1_2581 XM1_2934 XM1_2934 XM1_4186 XM1_4186 XM1_4314 XM1_4314 XM1_4663 XM1_4663 XM1_4664 XM1_4664 XM1_4734 XM1_4734 XM1_4735 XM1_4735 XM1_4736 XM1_4736 XM1_4737 XM1_4737 XM1_4738 XM1_4738 XM1_4739 XM1_4739 XM1_4740 XM1_4740
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XM1_0189Putative phage-related integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 'phage' integrase family. (474 aa)
XM1_0196Putative Resolvase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (211 aa)
XM1_0197Protein of unknown function; No homology to any previously reported sequences. (92 aa)
XM1_0650Protein of unknown function （DNA breaking-rejoining enzymes domain） No homology to any previously reported sequences. (567 aa)
XM1_2580Protein of unknown function; No homology to any previously reported sequences. (101 aa)
XM1_2581Putative Resolvase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (213 aa)
XM1_2934Conserved protein of unknown function (Integrase-like, catalytic core 276-428); Homologs of previously reported genes of unknown function. (446 aa)
XM1_4186Putative integrase-like protein y4lS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (184 aa)
XM1_4314Putative site-specific recombinase (Resolvase, N-terminal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (180 aa)
XM1_4663DNA-invertase; Function of strongly homologous gene; enzyme. (195 aa)
XM1_4664Homologs of previously reported genes of unknown function. (110 aa)
XM1_4734Homologs of previously reported genes of unknown function. (86 aa)
XM1_4735Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (93 aa)
XM1_4736Putative Integrase-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (183 aa)
XM1_4737Protein of unknown function; No homology to any previously reported sequences. (269 aa)
XM1_4738Homologs of previously reported genes of unknown function. (245 aa)
XM1_4739Homologs of previously reported genes of unknown function. (133 aa)
XM1_4740Homologs of previously reported genes of unknown function. (295 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.