STRINGSTRING
XM1_0017 XM1_0017 XM1_0018 XM1_0018 XM1_0190 XM1_0190 XM1_0191 XM1_0191 XM1_0192 XM1_0192 XM1_0193 XM1_0193 XM1_0194 XM1_0194 XM1_0195 XM1_0195 XM1_0482 XM1_0482 XM1_0483 XM1_0483 XM1_0484 XM1_0484 istA-2 istA-2 XM1_0486 XM1_0486 XM1_0487 XM1_0487 XM1_0489 XM1_0489 XM1_2280 XM1_2280 XM1_2302 XM1_2302 XM1_2303 XM1_2303 XM1_2304 XM1_2304 XM1_2306 XM1_2306 XM1_2310 XM1_2310 XM1_2313 XM1_2313 XM1_2376 XM1_2376 XM1_2377 XM1_2377 XM1_2378 XM1_2378 XM1_2379 XM1_2379 XM1_2452 XM1_2452 XM1_2453 XM1_2453 XM1_2454 XM1_2454 XM1_2455 XM1_2455 XM1_2456 XM1_2456 XM1_2457 XM1_2457 XM1_2458 XM1_2458 XM1_2459 XM1_2459 XM1_2460 XM1_2460 XM1_2461 XM1_2461 XM1_2462 XM1_2462 XM1_2469 XM1_2469 XM1_2470 XM1_2470 XM1_2471 XM1_2471 XM1_2472 XM1_2472 XM1_2473 XM1_2473 XM1_2474 XM1_2474 XM1_2984 XM1_2984 XM1_3349 XM1_3349 XM1_3350 XM1_3350 istA istA XM1_3352 XM1_3352
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XM1_0017Putative ISRSO14-transposase orfB protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (304 aa)
XM1_0018Putative superfamily I DNA and RNA helicase and helicase subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (89 aa)
XM1_0190Conserved protein of unknown function (GCN5-related N-acetyltransferase domain); Homologs of previously reported genes of unknown function. (171 aa)
XM1_0191Homologs of previously reported genes of unknown function. (98 aa)
XM1_0192Protein of unknown function; No homology to any previously reported sequences. (201 aa)
XM1_0193Protein of unknown function; No homology to any previously reported sequences. (62 aa)
XM1_0194Protein of unknown function; No homology to any previously reported sequences. (22 aa)
XM1_0195Protein of unknown function; No homology to any previously reported sequences. (116 aa)
XM1_0482Protein of unknown function; No homology to any previously reported sequences. (41 aa)
XM1_0483Homologs of previously reported genes of unknown function. (98 aa)
XM1_0484Protein of unknown function; No homology to any previously reported sequences. (73 aa)
istA-2Transposase; Function of strongly homologous gene; enzyme. (498 aa)
XM1_0486Putative Insertion sequence IS21 ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (279 aa)
XM1_0487Conserved protein of unknown function (GCN5-related N-acetyltransferase domain); Homologs of previously reported genes of unknown function. (120 aa)
XM1_0489Protein of unknown function; No homology to any previously reported sequences. (69 aa)
XM1_2280Protein of unknown function; Required for the transposition of the insertion element. (305 aa)
XM1_2302Conserved protein of unknown function (putative IS66 Orf2 like); Homologs of previously reported genes of unknown function. (85 aa)
XM1_2303Protein of unknown function; No homology to any previously reported sequences. (94 aa)
XM1_2304Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (485 aa)
XM1_2306Protein of unknown function; No homology to any previously reported sequences. (177 aa)
XM1_2310Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (240 aa)
XM1_2313Protein of unknown function; No homology to any previously reported sequences. (63 aa)
XM1_2376Putative transposase IS110 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (150 aa)
XM1_2377Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (452 aa)
XM1_2378Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (126 aa)
XM1_2379Protein of unknown function; No homology to any previously reported sequences. (67 aa)
XM1_2452Putative transposase of ISMex1, IS3 family (ORF 1); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (82 aa)
XM1_2453Putative sugar nucleotidyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (246 aa)
XM1_2454Putative gamma-glutamyl-gamma-aminobutyrate hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (197 aa)
XM1_2455Homologs of previously reported genes of unknown function. (774 aa)
XM1_2456Putative methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (259 aa)
XM1_2457Putative Adenylyl-sulfate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the APS kinase family. (167 aa)
XM1_2458Protein of unknown function; No homology to any previously reported sequences. (435 aa)
XM1_2459Protein of unknown function; No homology to any previously reported sequences. (23 aa)
XM1_2460Putative Integrase, catalytic region (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (125 aa)
XM1_2461Putative Phosphoglycerate mutase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (177 aa)
XM1_2462Homologs of previously reported genes of unknown function. (61 aa)
XM1_2469Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (357 aa)
XM1_2470Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (164 aa)
XM1_2471Putative Integrase catalytic region (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (158 aa)
XM1_2472Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (357 aa)
XM1_2473Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (132 aa)
XM1_2474Conserved protein of unknown function (putative partial transposase of ISMex1, IS3 family (ORF 2)); Homologs of previously reported genes of unknown function. (150 aa)
XM1_2984Protein of unknown function (putative transposes fragment); No homology to any previously reported sequences. (71 aa)
XM1_3349Protein of unknown function; No homology to any previously reported sequences. (220 aa)
XM1_3350Protein of unknown function; No homology to any previously reported sequences. (148 aa)
istATransposase; Function of strongly homologous gene; enzyme. (498 aa)
XM1_3352Transposase of ISMdi7, IS21 family (ORF 2); Function of strongly homologous gene; enzyme. (279 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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