STRINGSTRING
XM1_0102 XM1_0102 XM1_0103 XM1_0103 XM1_0104 XM1_0104 XM1_0105 XM1_0105 XM1_0106 XM1_0106 XM1_0107 XM1_0107 XM1_0108 XM1_0108 XM1_0109 XM1_0109 XM1_0110 XM1_0110 pxpA pxpA XM1_0795 XM1_0795 XM1_0796 XM1_0796 XM1_0941 XM1_0941 XM1_1125 XM1_1125 XM1_1603 XM1_1603 XM1_2312 XM1_2312 XM1_2314 XM1_2314 XM1_2327 XM1_2327 XM1_2439 XM1_2439 XM1_2440 XM1_2440 XM1_2441 XM1_2441 XM1_2442 XM1_2442 XM1_2463 XM1_2463 XM1_2464 XM1_2464 XM1_2465 XM1_2465 XM1_2466 XM1_2466 XM1_2467 XM1_2467 XM1_2468 XM1_2468 XM1_2650 XM1_2650 XM1_2651 XM1_2651 XM1_2653 XM1_2653 XM1_2655 XM1_2655 XM1_2976 XM1_2976 XM1_2977 XM1_2977 XM1_2978 XM1_2978 XM1_2979 XM1_2979 XM1_3020 XM1_3020 XM1_3021 XM1_3021 XM1_3022 XM1_3022 XM1_3023 XM1_3023 XM1_3024 XM1_3024 XM1_3025 XM1_3025 XM1_3026 XM1_3026 XM1_3027 XM1_3027 XM1_3028 XM1_3028 XM1_3408 XM1_3408 XM1_4349 XM1_4349
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XM1_0102Putative NAD-dependent protein deacetylase of SIR2 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (77 aa)
XM1_0103Protein of unknown function; No homology to any previously reported sequences. (78 aa)
XM1_0104Protein of unknown function; No homology to any previously reported sequences. (60 aa)
XM1_0105Homologs of previously reported genes of unknown function. (232 aa)
XM1_0106Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (155 aa)
XM1_0107Putative Transposase, IS4 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (125 aa)
XM1_0108Homologs of previously reported genes of unknown function. (174 aa)
XM1_0109Putative Allophanate hydrolase, subunit 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (236 aa)
XM1_0110Putative Allophanate hydrolase subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (348 aa)
pxpAPutative lactam utilization protein, UPF0271 family; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (256 aa)
XM1_0795Homologs of previously reported genes of unknown function. (54 aa)
XM1_0796Homologs of previously reported genes of unknown function. (146 aa)
XM1_0941Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (164 aa)
XM1_1125Putative transposase; Function of strongly homologous gene; enzyme. (342 aa)
XM1_1603Putative Cytochrome B561（Di-haem cytochrome, transmembrane,2-179） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (179 aa)
XM1_2312Putative transposase of ISAli9, IS5 family subgroup IS427. ORFA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (124 aa)
XM1_2314Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (122 aa)
XM1_2327Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (342 aa)
XM1_2439Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (342 aa)
XM1_2440Protein of unknown function; Homologs of previously reported genes of unknown function. (84 aa)
XM1_2441Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (165 aa)
XM1_2442Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (125 aa)
XM1_2463Homologs of previously reported genes of unknown function. (670 aa)
XM1_2464Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (102 aa)
XM1_2465Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (142 aa)
XM1_2466Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (402 aa)
XM1_2467Putative integrase/recombinase y4qK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (285 aa)
XM1_2468Exported protein of unknown function; No homology to any previously reported sequences. (113 aa)
XM1_2650Protein of unknown function; No homology to any previously reported sequences. (123 aa)
XM1_2651Homologs of previously reported genes of unknown function. (79 aa)
XM1_2653Homologs of previously reported genes of unknown function. (345 aa)
XM1_2655Putative branched-chain alpha-keto acid dehydrogenase subunit E2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (80 aa)
XM1_2976Transposase, IS4 family; Function of strongly homologous gene; enzyme. (125 aa)
XM1_2977Transposase of IS1355, IS5 family; Function of strongly homologous gene; enzyme. (155 aa)
XM1_2978Protein of unknown function; No homology to any previously reported sequences. (99 aa)
XM1_2979Protein of unknown function (MCP-signal associated domain 26-94); No homology to any previously reported sequences. (141 aa)
XM1_3020Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (125 aa)
XM1_3021Conserved protein of unknown function(containing Putative transposase IS4/IS5 family domain,21-95); Homologs of previously reported genes of unknown function. (155 aa)
XM1_3022Conserved protein of unknown function(containing TniQ domain,13-142); Homologs of previously reported genes of unknown function. (179 aa)
XM1_3023AAA domain-containing protein; Homologs of previously reported genes of unknown function. (305 aa)
XM1_3024Transposase; Function of strongly homologous gene; enzyme. (692 aa)
XM1_3025Conserved protein of unknown function(containing TnsA endonuclease, N-terminal domain,23-94); Homologs of previously reported genes of unknown function. (196 aa)
XM1_3026Uncharacterized protein; Homologs of previously reported genes of unknown function. (182 aa)
XM1_3027Putative peptidoglycan-binding domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (537 aa)
XM1_3028Conserved protein of unknown function(containing Rhodanese-like domain,8-143); Homologs of previously reported genes of unknown function. (144 aa)
XM1_3408Transcriptional regulator, IclR family; Function of strongly homologous gene; regulator. (265 aa)
XM1_4349Transposase; Function of strongly homologous gene; enzyme. (342 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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