STRINGSTRING
XM1_0102 XM1_0102 XM1_0103 XM1_0103 XM1_0104 XM1_0104 XM1_0105 XM1_0105 XM1_0106 XM1_0106 XM1_0107 XM1_0107 XM1_0108 XM1_0108 XM1_0109 XM1_0109 XM1_0110 XM1_0110 pxpA pxpA XM1_2312 XM1_2312 XM1_2439 XM1_2439 XM1_2440 XM1_2440 XM1_2441 XM1_2441 XM1_2442 XM1_2442 XM1_2463 XM1_2463 XM1_2464 XM1_2464 XM1_2465 XM1_2465 XM1_2466 XM1_2466 XM1_2467 XM1_2467 XM1_2468 XM1_2468 XM1_2976 XM1_2976 XM1_2977 XM1_2977 XM1_2978 XM1_2978 XM1_2979 XM1_2979 XM1_3408 XM1_3408
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XM1_0102Putative NAD-dependent protein deacetylase of SIR2 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (77 aa)
XM1_0103Protein of unknown function; No homology to any previously reported sequences. (78 aa)
XM1_0104Protein of unknown function; No homology to any previously reported sequences. (60 aa)
XM1_0105Homologs of previously reported genes of unknown function. (232 aa)
XM1_0106Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (155 aa)
XM1_0107Putative Transposase, IS4 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (125 aa)
XM1_0108Homologs of previously reported genes of unknown function. (174 aa)
XM1_0109Putative Allophanate hydrolase, subunit 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (236 aa)
XM1_0110Putative Allophanate hydrolase subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (348 aa)
pxpAPutative lactam utilization protein, UPF0271 family; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (256 aa)
XM1_2312Putative transposase of ISAli9, IS5 family subgroup IS427. ORFA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (124 aa)
XM1_2439Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (342 aa)
XM1_2440Protein of unknown function; Homologs of previously reported genes of unknown function. (84 aa)
XM1_2441Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (165 aa)
XM1_2442Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (125 aa)
XM1_2463Homologs of previously reported genes of unknown function. (670 aa)
XM1_2464Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (102 aa)
XM1_2465Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (142 aa)
XM1_2466Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (402 aa)
XM1_2467Putative integrase/recombinase y4qK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (285 aa)
XM1_2468Exported protein of unknown function; No homology to any previously reported sequences. (113 aa)
XM1_2976Transposase, IS4 family; Function of strongly homologous gene; enzyme. (125 aa)
XM1_2977Transposase of IS1355, IS5 family; Function of strongly homologous gene; enzyme. (155 aa)
XM1_2978Protein of unknown function; No homology to any previously reported sequences. (99 aa)
XM1_2979Protein of unknown function (MCP-signal associated domain 26-94); No homology to any previously reported sequences. (141 aa)
XM1_3408Transcriptional regulator, IclR family; Function of strongly homologous gene; regulator. (265 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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