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atpH atpH XM1_0218 XM1_0218 atpC atpC atpD atpD atpG atpG atpA atpA XM1_0376 XM1_0376 XM1_0564 XM1_0564 amtB amtB XM1_0874 XM1_0874 XM1_1180 XM1_1180 XM1_1241 XM1_1241 atpF atpF atpG-2 atpG-2 atpE atpE atpB atpB XM1_1454 XM1_1454 gltI gltI XM1_1598 XM1_1598 XM1_1793 XM1_1793 XM1_1820 XM1_1820 XM1_1846 XM1_1846 XM1_1913 XM1_1913 XM1_2419 XM1_2419 XM1_2677 XM1_2677 XM1_2691 XM1_2691 XM1_3111 XM1_3111 XM1_3180 XM1_3180 XM1_3366 XM1_3366 motA motA motB motB XM1_3556 XM1_3556 XM1_3805 XM1_3805 XM1_4273 XM1_4273 XM1_4298 XM1_4298 XM1_4327 XM1_4327 XM1_4403 XM1_4403 fliI fliI
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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atpHATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (184 aa)
XM1_0218Putative Outer membrane protein A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (341 aa)
atpCF1 sector of membrane-bound ATP synthase, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (133 aa)
atpDMembrane-bound ATP synthase, F1 sector, beta-subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (474 aa)
atpGATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (294 aa)
atpAF1 sector of membrane-bound ATP synthase, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (509 aa)
XM1_0376Homologs of previously reported genes of unknown function. (77 aa)
XM1_0564Porin; Homologs of previously reported genes of unknown function. (486 aa)
amtBAmmonium transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter. (452 aa)
XM1_0874Homologs of previously reported genes of unknown function. (423 aa)
XM1_1180Polar amino acid transport system substrate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (254 aa)
XM1_1241Putative Small-conductance mechanosensitive channel (Mechanosensitive ion channel MscS,211-410); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (421 aa)
atpFATP synthase subunit b(ATPase, F0 complex, subunit B/B', bacterial/chloroplast,25-152); Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (177 aa)
atpG-2ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (164 aa)
atpEATP synthase subunit c（ATPase, F0/V0 complex, subunit C,4-74） F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (74 aa)
atpBATP synthase subunit a（ATPase, F0 complex, subunit A,13-262） Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (262 aa)
XM1_1454OmpA-OmpF porin, OOP family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (412 aa)
gltIGlutamate and aspartate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (302 aa)
XM1_1598Homologs of previously reported genes of unknown function. (383 aa)
XM1_1793Putative TonB-dependent receptor plug（TonB-dependent receptor, beta-barrel,167-669） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (670 aa)
XM1_1820Putative glutamate and aspartate transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (550 aa)
XM1_1846Putative Adenylate cyclase 1(Adenylyl cyclase class-3/4/guanylyl cyclase,482-667); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (748 aa)
XM1_1913Putative membrane protein（Outer membrane protein, OmpA/MotB, C-terminal,316-398） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (414 aa)
XM1_2419Putative Carbohydrate-selective porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (465 aa)
XM1_2677Ammonium transporter; Function of strongly homologous gene; transporter. (426 aa)
XM1_2691Putative Adenylate cyclase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (716 aa)
XM1_3111Amino acid ABC transporter periplasmic protein; Function of strongly homologous gene; transporter. (266 aa)
XM1_3180Outer membrane protein and related peptidoglycan-associated lipo protein; Function of strongly homologous gene; membrane component. (241 aa)
XM1_3366Flagellar motor component; Function of strongly homologous gene; putative structure. (265 aa)
motAProton conductor component of flagella motor; Function of homologous gene experimentally demonstrated in an other organism; cell process. (286 aa)
motBFlagellar motor protein; Function of strongly homologous gene; cell process. (344 aa)
XM1_3556Putative extracellular solute-binding protein, family 3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (244 aa)
XM1_3805Carbohydrate-selective porin; Function of strongly homologous gene; transporter. (465 aa)
XM1_4273Putative outer membrane protein related peptidoglycan-associated (Lipo) protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (278 aa)
XM1_4298Homologs of previously reported genes of unknown function. (519 aa)
XM1_4327Putative carbohydrate-selective porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (461 aa)
XM1_4403TonB-dependent receptor; Function of strongly homologous gene; receptor. (701 aa)
fliIFlagellum-specific ATP synthase; Function of strongly homologous gene; structure. (450 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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