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fabI-2 fabI-2 XM1_0355 XM1_0355 fabI fabI dapB dapB XM1_0801 XM1_0801 gcdH gcdH XM1_0836 XM1_0836 capL capL mmgC mmgC tyrC tyrC sdhB sdhB sdhA sdhA sdhD sdhD sdhC sdhC pyrD pyrD mmgC-2 mmgC-2 acdA acdA XM1_2277 XM1_2277 XM1_2283 XM1_2283 XM1_2483 XM1_2483 XM1_2744 XM1_2744 XM1_3143 XM1_3143 dusB dusB XM1_4457 XM1_4457 XM1_3398 XM1_3398 ivd ivd acads acads XM1_3447 XM1_3447 cobK cobK hemN hemN
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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fabI-2Enoyl-[acyl-carrier-protein] reductase, NADH-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (272 aa)
XM1_0355Putative_PNPOx domain-containing protein; Homologs of previously reported genes of unknown function. (186 aa)
fabIEnoyl-[acyl-carrier-protein] reductase [NADH] 1; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (267 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (265 aa)
XM1_0801Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (377 aa)
gcdHglutaryl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (392 aa)
XM1_0836Homologs of previously reported genes of unknown function. (145 aa)
capLProtein CapL; Function of strongly homologous gene; enzyme; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (423 aa)
mmgC(2S)-methylsuccinyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (553 aa)
tyrCProtein TyrC(Prephenate dehydrogenase,23-281); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (296 aa)
sdhBSuccinate dehydrogenase / fumarate reductase, iron-sulfur subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier. (259 aa)
sdhASuccinate dehydrogenase flavoprotein subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (599 aa)
sdhDSuccinate dehydrogenase / fumarate reductase, membrane anchor subunit; Function of strongly homologous gene; membrane component. (126 aa)
sdhCSuccinate dehydrogenase / fumarate reductase, cytochrome b subunit; Function of strongly homologous gene; enzyme. (109 aa)
pyrDDihydro-orotate oxidase, FMN-linked（Aldolase-type TIM barrel,5-351） Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (355 aa)
mmgC-2Short chain acyl-CoA dehydrogenase(Acyl-CoA dehydrogenase/oxidase,3-240); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (378 aa)
acdAFunction of homologous gene experimentally demonstrated in an other organism; enzyme. (378 aa)
XM1_2277Medium-chain specific acyl-CoA dehydrogenase, mitochondrial; Function of strongly homologous gene; enzyme. (377 aa)
XM1_2283Acyl-CoA dehydrogenase domain protein; Function of strongly homologous gene; enzyme. (388 aa)
XM1_2483Putative acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (377 aa)
XM1_2744Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (554 aa)
XM1_3143Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate. (329 aa)
dusBtRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (335 aa)
XM1_4457Putative heme iron utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (248 aa)
XM1_3398Acyl-CoA dehydrogenase; Function of strongly homologous gene; enzyme. (394 aa)
ivdAcyl-CoA dehydrogenase/oxidase; Function of strongly homologous gene; enzyme. (389 aa)
acadsAcyl-CoA dehydrogenase, short-chain specific; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (383 aa)
XM1_3447Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (592 aa)
cobKPrecorrin-6A reductase; Function of strongly homologous gene; enzyme. (249 aa)
hemNOxygen-independent coproporphyrinogen-III oxidase; Function of strongly homologous gene; enzyme; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (451 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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