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XM1_1893 XM1_1893 XM1_2049 XM1_2049 arsA arsA XM1_2305 XM1_2305 mamK mamK XM1_2406 XM1_2406 ftsZ-2 ftsZ-2 XM1_2567 XM1_2567 XM1_2614 XM1_2614 XM1_2620 XM1_2620 dnaB-2 dnaB-2 uvrA uvrA copA copA lon lon clpX clpX XM1_3789 XM1_3789 clpB clpB copA-2 copA-2 norQ norQ XM1_4094 XM1_4094 ftsH ftsH ruvB ruvB ruvA ruvA rarA rarA XM1_4363 XM1_4363 XM1_4608 XM1_4608 uvrD uvrD fliI fliI fixI fixI XM1_0432 XM1_0432 XM1_0398 XM1_0398 XM1_0252 XM1_0252 XM1_0043 XM1_0043 hmrR hmrR mutL mutL htpG htpG ychF ychF hslU hslU XM1_1275 XM1_1275 smc smc clpA clpA cpaE cpaE XM1_1398 XM1_1398 cobS-2 cobS-2 XM1_1469 XM1_1469 uvrB uvrB XM1_1734 XM1_1734
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
XM1_1893Protein of unknown function(Domain of unknown function DUF59,4-78); No homology to any previously reported sequences. (101 aa)
XM1_2049Superfamily I DNA/RNA helicase; Function of strongly homologous gene; enzyme. (637 aa)
arsAPutative Arsenical pump-driving ATPase; Anion-transporting ATPase; Belongs to the arsA ATPase family. (579 aa)
XM1_2305Putative ATP-dependent Zn protease (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the AAA ATPase family. (298 aa)
mamKMagnetosome cytoskeleton protein MamK; Function of strongly homologous gene; putative enzyme. (347 aa)
XM1_2406Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase; Function of strongly homologous gene; transporter. (757 aa)
ftsZ-2Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (311 aa)
XM1_2567Putative HAD superfamily P-type ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (883 aa)
XM1_2614Putative Prophage LambdaW4, terminase large subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (662 aa)
XM1_2620Putative Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (488 aa)
dnaB-2Replicative DNA helicase dnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (505 aa)
uvrAATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (947 aa)
copACopper transporter ATPase; Function of homologous gene experimentally demonstrated in an other organism; transporter. (724 aa)
lonDNA-binding ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (803 aa)
clpXATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (421 aa)
XM1_3789Putative ATPase domain (N-terminal fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the AAA ATPase family. (675 aa)
clpBProtein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (863 aa)
copA-2Copper transporter ATPase; Function of strongly homologous gene; enzyme. (802 aa)
norQNorQ protein required for nitric oxide reductase (Nor) activity; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (260 aa)
XM1_4094Protein of unknown function (putative phage tail fiber protein); No homology to any previously reported sequences. (168 aa)
ftsHProtease, ATP-dependent zinc-metallo （Cell division protein FtsH） Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (638 aa)
ruvBATP-dependent DNA helicase, component of RuvABC resolvasome; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (347 aa)
ruvAHolliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (210 aa)
rarAReplication-associated recombination protein A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (429 aa)
XM1_4363Putative iron-sulfur protein NUBPL (Protein mrp homolog); Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (372 aa)
XM1_4608Protein of unknown function; No homology to any previously reported sequences. (501 aa)
uvrDDNA-dependent ATPase I and helicase II; Function of strongly homologous gene; enzyme. (760 aa)
fliIFlagellum-specific ATP synthase; Function of strongly homologous gene; structure. (450 aa)
fixINitrogen fixation protein FixI; Function of strongly homologous gene; enzyme. (781 aa)
XM1_0432Putative ATPase (MoxR-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (330 aa)
XM1_0398Protein of unknown function; No homology to any previously reported sequences. (413 aa)
XM1_0252Putative ATPase, AAA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (281 aa)
XM1_0043Bacteriophage tail assembly protein; No homology to any previously reported sequences. (664 aa)
hmrRHeavy metal-dependent transcriptional regulator, MerR family; Function of strongly homologous gene; regulator. (519 aa)
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (602 aa)
htpGMolecular chaperone HSP90 family; Molecular chaperone. Has ATPase activity. (623 aa)
ychFPutative GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (367 aa)
hslUMolecular chaperone and ATPase component of HslUV protease; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (442 aa)
XM1_1275Conserved protein of unknown function（NERD,16-109） Homologs of previously reported genes of unknown function. (385 aa)
smcChromosome partition protein Smc(Structural maintenance of chromosomes protein, prokaryotic,3-1142); Required for chromosome condensation and partitioning. Belongs to the SMC family. (1155 aa)
clpAATP-dependent Clp protease ATP-binding subunit ClpA; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ClpA/ClpB family. (764 aa)
cpaEFlp pilus assembly protein, ATPase CpaE; Function of strongly homologous gene; transporter. (396 aa)
XM1_1398AFG1-like ATPase; Function of strongly homologous gene; enzyme. (387 aa)
cobS-2Aerobic cobaltochelatase subunit CobS; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (333 aa)
XM1_1469P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter. (874 aa)
uvrBUvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (703 aa)
XM1_1734Conserved protein of unknown function(AAA+ ATPase domain,194-344); Homologs of previously reported genes of unknown function. (412 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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