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ctaD ctaD petA petA atpD atpD atpA atpA fixN fixN fixI fixI pstB pstB pstB-2 pstB-2 cvrA cvrA XM1_1164 XM1_1164 XM1_1469 XM1_1469 XM1_1700 XM1_1700 cysW cysW pstB-3 pstB-3 nosZ nosZ XM1_2406 XM1_2406 XM1_2567 XM1_2567 cysT cysT cysW-2 cysW-2 cysA cysA ctaE ctaE ctaC ctaC XM1_3041 XM1_3041 XM1_3042 XM1_3042 XM1_3047 XM1_3047 XM1_3048 XM1_3048 hppA hppA znuC znuC copA copA copA-2 copA-2 norE norE norB norB modC modC XM1_4501 XM1_4501 fliI fliI
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
ctaDCytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (533 aa)
petAUbiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (184 aa)
atpDMembrane-bound ATP synthase, F1 sector, beta-subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (474 aa)
atpAF1 sector of membrane-bound ATP synthase, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (509 aa)
fixNCytochrome C oxydase, CytN subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the heme-copper respiratory oxidase family. (483 aa)
fixINitrogen fixation protein FixI; Function of strongly homologous gene; enzyme. (781 aa)
pstBPhosphate transporter subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (258 aa)
pstB-2Phosphate transporter subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (278 aa)
cvrAK(+)/H(+) antiporter NhaP2; Function of homologous gene experimentally demonstrated in an other organism; transporter. (597 aa)
XM1_1164Dienelactone hydrolase; Function of strongly homologous gene; enzyme. (367 aa)
XM1_1469P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter. (874 aa)
XM1_1700Homologs of previously reported genes of unknown function. (431 aa)
cysWSulfate/thiosulfate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (290 aa)
pstB-3Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (259 aa)
nosZNitrous oxide reductase; Function of strongly homologous gene; enzyme. (768 aa)
XM1_2406Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase; Function of strongly homologous gene; transporter. (757 aa)
XM1_2567Putative HAD superfamily P-type ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (883 aa)
cysTSulfate transport protein (ABC superfamily, membrane); Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (283 aa)
cysW-2Sulfate transport protein (ABC superfamily, membrane); Function of homologous gene experimentally demonstrated in an other organism; transporter. (279 aa)
cysASulfate/thiosulfate ABC transporter; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (347 aa)
ctaECytochrome c oxidase subunit III; Function of strongly homologous gene; enzyme. (271 aa)
ctaCCytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (280 aa)
XM1_3041Heme/copper-type cytochrome/quinol oxidase, subunit 2; Function of strongly homologous gene; enzyme. (181 aa)
XM1_3042Heme/copper-type cytochrome/quinol oxidase, subunit 1; Function of strongly homologous gene; enzyme. (560 aa)
XM1_3047Putative Permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (452 aa)
XM1_3048Heme/copper-type cytochrome/quinol oxidases, subunit; Function of strongly homologous gene; enzyme. (162 aa)
hppAK(+)-insensitive pyrophosphate-energized proton pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. (693 aa)
znuCZinc transporter subunit: ATP-binding component of ABC superfamily; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (263 aa)
copACopper transporter ATPase; Function of homologous gene experimentally demonstrated in an other organism; transporter. (724 aa)
copA-2Copper transporter ATPase; Function of strongly homologous gene; enzyme. (802 aa)
norECytochrome c oxidase, subunit III (NorE protein involved in nitric oxide reduction); Function of strongly homologous gene; enzyme. (189 aa)
norBNitric oxide reductase subunit B; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the heme-copper respiratory oxidase family. (446 aa)
modCMolybdate transporter subunit modC (ATP-binding component of ABC superfamily); Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (363 aa)
XM1_4501Homologs of previously reported genes of unknown function. (140 aa)
fliIFlagellum-specific ATP synthase; Function of strongly homologous gene; structure. (450 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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