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XM1_3634 XM1_3634 pntB pntB pntA pntA XM1_3736 XM1_3736 XM1_3778 XM1_3778 feoB-3 feoB-3 XM1_3963 XM1_3963 copA-2 copA-2 XM1_4012 XM1_4012 norE norE norB norB XM1_4167 XM1_4167 XM1_4237 XM1_4237 XM1_4257 XM1_4257 crcB crcB modB modB modC modC fieF fieF XM1_4501 XM1_4501 fliI fliI XM1_4734 XM1_4734 nrtD nrtD petA petA trkH trkH trkH-2 trkH-2 lldP lldP atpC atpC atpD atpD atpG atpG atpA atpA atpH atpH fixN fixN fixI fixI XM1_0578 XM1_0578 XM1_0596 XM1_0596 pstB pstB XM1_0782 XM1_0782 czcD-2 czcD-2 amtB amtB pstB-2 pstB-2 cvrA cvrA XM1_1164 XM1_1164 ccmA ccmA cbiM cbiM cbiN cbiN XM1_1204 XM1_1204 XM1_1241 XM1_1241 atpF atpF atpG-2 atpG-2 atpE atpE atpB atpB XM1_1339 XM1_1339 XM1_1371 XM1_1371 XM1_1469 XM1_1469 XM1_1487 XM1_1487 XM1_1700 XM1_1700 cysP cysP cysU cysU cysW cysW trkD trkD trkD-2 trkD-2 XM1_1846 XM1_1846 XM1_1880 XM1_1880 XM1_1918 XM1_1918 XM1_1919 XM1_1919 pstB-3 pstB-3 XM1_2045 XM1_2045 nosZ nosZ XM1_2241 XM1_2241 arsA arsA XM1_2244 XM1_2244 XM1_2307 XM1_2307 mamM mamM mamB mamB mamB-2 mamB-2 mamB-3 mamB-3 XM1_2406 XM1_2406 XM1_2407 XM1_2407 feoB feoB XM1_2517 XM1_2517 XM1_2567 XM1_2567 XM1_2677 XM1_2677 XM1_2691 XM1_2691 cysP-2 cysP-2 cysT cysT cysW-2 cysW-2 cysA cysA ctaE ctaE ctaD ctaD ctaC ctaC XM1_3041 XM1_3041 XM1_3042 XM1_3042 XM1_3047 XM1_3047 XM1_3048 XM1_3048 XM1_3099 XM1_3099 hppA hppA trkA trkA XM1_3183 XM1_3183 znuC znuC XM1_3419 XM1_3419 potG potG feoB-2 feoB-2 copA copA
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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gene neighborhood
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XM1_3634Homologs of previously reported genes of unknown function. (469 aa)
pntBPyridine nucleotide transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. (469 aa)
pntAPyridine nucleotide transhydrogenase, alpha subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. (528 aa)
XM1_3736ABC-type phosphate/phosphonate transport system; Function of strongly homologous gene; transporter. (278 aa)
XM1_3778Putative permease of the major facilitator superfamily (MFS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (412 aa)
feoB-3Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (704 aa)
XM1_3963Predicted signal-transduction protein containing cAMP-binding and CBS domains; Function of strongly homologous gene; putative receptor. (479 aa)
copA-2Copper transporter ATPase; Function of strongly homologous gene; enzyme. (802 aa)
XM1_4012ABC-type phosphate/phosphonate transport system; Function of strongly homologous gene; transporter. (278 aa)
norECytochrome c oxidase, subunit III (NorE protein involved in nitric oxide reduction); Function of strongly homologous gene; enzyme. (189 aa)
norBNitric oxide reductase subunit B; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the heme-copper respiratory oxidase family. (446 aa)
XM1_4167Putative periplasmic binding protein-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (284 aa)
XM1_4237Putative potassium channel protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (360 aa)
XM1_4257Putative sulfate permease and related transporters (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (740 aa)
crcBPutative inner membrane protein CrcB associated with chromosome condensation; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (128 aa)
modBMolybdate transporter subunit (membrane component of ABC superfamily); Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (230 aa)
modCMolybdate transporter subunit modC (ATP-binding component of ABC superfamily); Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (363 aa)
fieFCation-efflux pump FieF; Function of strongly homologous gene; transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (300 aa)
XM1_4501Homologs of previously reported genes of unknown function. (140 aa)
fliIFlagellum-specific ATP synthase; Function of strongly homologous gene; structure. (450 aa)
XM1_4734Homologs of previously reported genes of unknown function. (86 aa)
nrtDPutative Ti-type conjugative transfer system, TraG-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (553 aa)
petAUbiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (184 aa)
trkHTrk system potassium uptake protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. (482 aa)
trkH-2Trk system potassium uptake protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. (482 aa)
lldPL-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (547 aa)
atpCF1 sector of membrane-bound ATP synthase, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (133 aa)
atpDMembrane-bound ATP synthase, F1 sector, beta-subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (474 aa)
atpGATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (294 aa)
atpAF1 sector of membrane-bound ATP synthase, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (509 aa)
atpHATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (184 aa)
fixNCytochrome C oxydase, CytN subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the heme-copper respiratory oxidase family. (483 aa)
fixINitrogen fixation protein FixI; Function of strongly homologous gene; enzyme. (781 aa)
XM1_0578Putative ABC-type cobalt transport system, permease component CbiQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (243 aa)
XM1_0596Homologs of previously reported genes of unknown function. (224 aa)
pstBPhosphate transporter subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (258 aa)
XM1_0782Putative periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (297 aa)
czcD-2Co/Zn/Cd cation efflux transporter, CDF family; Function of homologous gene experimentally demonstrated in an other organism; transporter. (310 aa)
amtBAmmonium transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter. (452 aa)
pstB-2Phosphate transporter subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (278 aa)
cvrAK(+)/H(+) antiporter NhaP2; Function of homologous gene experimentally demonstrated in an other organism; transporter. (597 aa)
XM1_1164Dienelactone hydrolase; Function of strongly homologous gene; enzyme. (367 aa)
ccmACytochrome c biogenesis ATP-binding export protein CcmA(ABC transporter, haem export, CcmA,11-211); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (221 aa)
cbiMCobalt transport protein CbiM(Cobalamin (vitamin B12) biosynthesis protein CbiM,1-209); Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (216 aa)
cbiNCobalt transport protein CbiN(Cobalt transport protein CbiN,6-71); Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (90 aa)
XM1_1204Putative Cobalt transport protein CbiQ(ABC transporter CbiQ family,20-206); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (244 aa)
XM1_1241Putative Small-conductance mechanosensitive channel (Mechanosensitive ion channel MscS,211-410); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (421 aa)
atpFATP synthase subunit b(ATPase, F0 complex, subunit B/B', bacterial/chloroplast,25-152); Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (177 aa)
atpG-2ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (164 aa)
atpEATP synthase subunit c(ATPase, F0/V0 complex, subunit C,4-74) F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (74 aa)
atpBATP synthase subunit a(ATPase, F0 complex, subunit A,13-262) Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (262 aa)
XM1_1339Putative K+/H+ exchanger; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (434 aa)
XM1_1371Iron(III)-transport system ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily. (353 aa)
XM1_1469P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter. (874 aa)
XM1_1487Magnesium transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (331 aa)
XM1_1700Homologs of previously reported genes of unknown function. (431 aa)
cysPThiosulfate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (342 aa)
cysUSulfate/thiosulfate transporter subunit; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (274 aa)
cysWSulfate/thiosulfate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (290 aa)
trkDPotassium transporter(K+ potassium transporter,24-556) Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. (635 aa)
trkD-2Potassium transporter(K+ potassium transporter,18-549) Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. (629 aa)
XM1_1846Putative Adenylate cyclase 1(Adenylyl cyclase class-3/4/guanylyl cyclase,482-667); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (748 aa)
XM1_1880Putative copper/silver efflux system, membrane component(Acriflavin resistance protein,5-1018); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1033 aa)
XM1_1918Putative high-affinity nickel-transporter (Nickel/cobalt transporter, high-affinity 72-194); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the NiCoT transporter (TC 2.A.52) family. (312 aa)
XM1_1919Protein of unknown function(Protein of unknown function DUF1007,4-172) No homology to any previously reported sequences. (192 aa)
pstB-3Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (259 aa)
XM1_2045Mg2+ and Co2+ transporter; Function of strongly homologous gene; transporter. (341 aa)
nosZNitrous oxide reductase; Function of strongly homologous gene; enzyme. (768 aa)
XM1_2241Homologs of previously reported genes of unknown function. (339 aa)
arsAPutative Arsenical pump-driving ATPase; Anion-transporting ATPase; Belongs to the arsA ATPase family. (579 aa)
XM1_2244Putative High-affinity Fe2+/Pb2+ permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (269 aa)
XM1_2307Putative ABC-type phosphate/phosphonate transport system (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (137 aa)
mamMMagnetosome protein MamM; Function of strongly homologous gene; putative membrane component; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (318 aa)
mamBMagnetosome protein MamB; Function of strongly homologous gene; putative transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (296 aa)
mamB-2Magnetosome protein MamB; Function of strongly homologous gene; putative transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (311 aa)
mamB-3Magnetosome protein MamB; Function of strongly homologous gene; transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (296 aa)
XM1_2406Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase; Function of strongly homologous gene; transporter. (757 aa)
XM1_2407Putative Co/Zn/Cd efflux system component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (318 aa)
feoBFerrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (704 aa)
XM1_2517Putative Heavy metal efflux pump, CzcA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1043 aa)
XM1_2567Putative HAD superfamily P-type ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (883 aa)
XM1_2677Ammonium transporter; Function of strongly homologous gene; transporter. (426 aa)
XM1_2691Putative Adenylate cyclase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (716 aa)
cysP-2Sulfate transport protein (ABC superfamily, peri_bind); Function of homologous gene experimentally demonstrated in an other organism; transporter. (347 aa)
cysTSulfate transport protein (ABC superfamily, membrane); Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (283 aa)
cysW-2Sulfate transport protein (ABC superfamily, membrane); Function of homologous gene experimentally demonstrated in an other organism; transporter. (279 aa)
cysASulfate/thiosulfate ABC transporter; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (347 aa)
ctaECytochrome c oxidase subunit III; Function of strongly homologous gene; enzyme. (271 aa)
ctaDCytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (533 aa)
ctaCCytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (280 aa)
XM1_3041Heme/copper-type cytochrome/quinol oxidase, subunit 2; Function of strongly homologous gene; enzyme. (181 aa)
XM1_3042Heme/copper-type cytochrome/quinol oxidase, subunit 1; Function of strongly homologous gene; enzyme. (560 aa)
XM1_3047Putative Permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (452 aa)
XM1_3048Heme/copper-type cytochrome/quinol oxidases, subunit; Function of strongly homologous gene; enzyme. (162 aa)
XM1_3099Putative chromate transporter (ChrA-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (454 aa)
hppAK(+)-insensitive pyrophosphate-energized proton pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. (693 aa)
trkANAD-binding component of TrK potassium transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter. (458 aa)
XM1_3183GDT1 family protein; Homologs of previously reported genes of unknown function. (193 aa)
znuCZinc transporter subunit: ATP-binding component of ABC superfamily; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (263 aa)
XM1_3419Protein of unknown function; No homology to any previously reported sequences. (469 aa)
potGPutrescine transporter subunit: ATP-binding component of ABC superfamily; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (379 aa)
feoB-2Fused ferrous iron transporter, protein B: GTP-binding protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (776 aa)
copACopper transporter ATPase; Function of homologous gene experimentally demonstrated in an other organism; transporter. (724 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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