STRINGSTRING
XM1_4012 XM1_4012 nrtD nrtD XM1_0782 XM1_0782 XM1_2307 XM1_2307 XM1_3736 XM1_3736 XM1_4167 XM1_4167
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XM1_4012ABC-type phosphate/phosphonate transport system; Function of strongly homologous gene; transporter. (278 aa)
nrtDPutative Ti-type conjugative transfer system, TraG-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (553 aa)
XM1_0782Putative periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (297 aa)
XM1_2307Putative ABC-type phosphate/phosphonate transport system (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (137 aa)
XM1_3736ABC-type phosphate/phosphonate transport system; Function of strongly homologous gene; transporter. (278 aa)
XM1_4167Putative periplasmic binding protein-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (284 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: low (26%) [HD]