STRINGSTRING
gyrB gyrB XM1_0015 XM1_0015 rimM rimM rplS rplS rplU rplU rpmA rpmA XM1_0320 XM1_0320 recR recR XM1_0327 XM1_0327 rpsO rpsO recQ recQ priA priA XM1_0430 XM1_0430 XM1_0440 XM1_0440 XM1_0486 XM1_0486 rplT rplT rpmI rpmI XM1_0571 XM1_0571 rpsA rpsA rpmH rpmH rplY rplY parB-2 parB-2 queE queE rpmB rpmB ihfB ihfB smc smc XM1_1340 XM1_1340 clpS clpS XM1_1435 XM1_1435 pduO pduO recN recN ftsZ ftsZ XM1_1522 XM1_1522 XM1_1531 XM1_1531 XM1_1532 XM1_1532 flgI flgI XM1_1639 XM1_1639 holC holC rpmG rpmG shc shc XM1_2017 XM1_2017 rplK rplK rplA rplA rplJ rplJ rplL rplL rpsL rpsL rpsG rpsG rpsJ rpsJ rplC rplC rplD rplD rplW rplW rplB rplB rpsS rpsS rplV rplV rpsC rpsC rplP rplP rpmC rpmC rpsQ rpsQ rplN rplN rplX rplX rplE rplE rpsN rpsN rpsH rpsH rplF rplF rplR rplR rpsE rpsE rpmD rpmD rplO rplO rpsM rpsM rpsK rpsK rplQ rplQ rpmE rpmE XM1_2293 XM1_2293 mamK mamK ftsZ-2 ftsZ-2 XM1_2490 XM1_2490 XM1_2620 XM1_2620 XM1_2762 XM1_2762 XM1_2774 XM1_2774 dnaB-2 dnaB-2 rplI rplI rpsR rpsR rpsF rpsF rpsD rpsD recO recO rpmJ rpmJ parB parB rpmF rpmF rpsB rpsB gyrA gyrA XM1_3352 XM1_3352 parC parC XM1_3396 XM1_3396 rpsU rpsU XM1_3712 XM1_3712 draG draG XM1_4157 XM1_4157 parE parE XM1_4268 XM1_4268 rarA rarA flgH flgH flgG flgG flgF flgF fliL fliL fliM fliM XM1_4377 XM1_4377 rpsI rpsI rplM rplM XM1_4424 XM1_4424 dnaG dnaG XM1_4717 XM1_4717 topA topA fliI fliI rpsT rpsT czcA-2 czcA-2 FliF FliF fliG fliG fliN fliN fliR fliR fliQ-2 fliQ-2 fliE fliE flgC-2 flgC-2 flgB flgB fliP fliP rpsP rpsP
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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gyrBProtein of unknown function; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (816 aa)
XM1_0015Putative site-specific recombinase, resolvase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (689 aa)
rimM16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (176 aa)
rplS50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (145 aa)
rplU50S ribosomal subunit protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (100 aa)
rpmA50S ribosomal protein L27; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL27 family. (89 aa)
XM1_0320Conserved protein of unknown function (YbaB-like DNA-binding protein) Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (107 aa)
recRRecombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (197 aa)
XM1_0327Conserved protein of unknown function(Chemotaxis phosphatase, CheZ) Homologs of previously reported genes of unknown function. (184 aa)
rpsO30S ribosomal subunit protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa)
recQATP-dependent DNA helicase RecQ; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (608 aa)
priAPrimosomal protein N'(replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (733 aa)
XM1_0430Putative transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (206 aa)
XM1_0440Putative inhibitor of MCP methylation, CheC-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (206 aa)
XM1_0486Putative Insertion sequence IS21 ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (279 aa)
rplT50S ribosomal protein L20, also posttranslational autoregulator; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (118 aa)
rpmI50S ribosomal subunit protein L35; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL35 family. (67 aa)
XM1_0571Putative ribosome-associated, sigma 54 modulation protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (120 aa)
rpsA30S ribosomal subunit protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (565 aa)
rpmH50S ribosomal protein L34; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)
rplY50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (202 aa)
parB-2Chromosome-partitioning protein ParB; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the ParB family. (314 aa)
queE7-carboxy-7-deazaguanine synthase homolog(Radical SAM,45-114); Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (202 aa)
rpmB50S ribosomal protein L28(Ribosomal protein L28,3.63); Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the bacterial ribosomal protein bL28 family. (101 aa)
ihfBIntegration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (96 aa)
smcChromosome partition protein Smc(Structural maintenance of chromosomes protein, prokaryotic,3-1142); Required for chromosome condensation and partitioning. Belongs to the SMC family. (1155 aa)
XM1_1340Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (192 aa)
clpSATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (110 aa)
XM1_1435Conserved protein of unknown function(Uncharacterised protein family UPF0145,27-132) Homologs of previously reported genes of unknown function; Belongs to the UPF0145 family. (133 aa)
pduOCorrinoid adenosyltransferase; Function of strongly homologous gene; enzyme; Belongs to the Cob(I)alamin adenosyltransferase family. (188 aa)
recNDNA repair protein RecN(DNA recombination/repair protein RecN,1-552); May be involved in recombinational repair of damaged DNA. (553 aa)
ftsZCell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (538 aa)
XM1_1522Conserved protein of unknown function (Chemotaxis phosphatase, CheZ; Homologs of previously reported genes of unknown function. (243 aa)
XM1_1531Conserved protein of unknown function (Flagellin, D0/D1 domain); Homologs of previously reported genes of unknown function. (712 aa)
XM1_1532Putative Flagellar hook-associated protein(Flagellar hook-associated protein, FlgK,7-365); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure; Belongs to the flagella basal body rod proteins family. (858 aa)
flgIFlagellar basal body P-ring protein(Flagellar P-ring protein,41-391); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (392 aa)
XM1_1639Protein of unknown function(ATPase, AAA-type, core,38-151); No homology to any previously reported sequences. (217 aa)
holCDNA polymerase III subunit chi; Function of strongly homologous gene; enzyme. (151 aa)
rpmG50S ribosomal subunit protein L33 (Ribosomal protein L33,1-55); Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL33 family. (55 aa)
shcSqualene--hopene cyclase(Hopene cyclase,21-640); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (651 aa)
XM1_2017Putative Flagellar hook protein FlgE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (542 aa)
rplK50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (143 aa)
rplA50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (230 aa)
rplJ50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (213 aa)
rplL50S ribosomal subunit protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (124 aa)
rpsL30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (123 aa)
rpsG30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rpsJ30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa)
rplC50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (229 aa)
rplD50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (206 aa)
rplW50S ribosomal subunit protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (102 aa)
rplB50S ribosomal subunit protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (275 aa)
rpsS30S ribosomal subunit protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
rplV50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (128 aa)
rpsC30S ribosomal subunit protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (228 aa)
rplP50S ribosomal subunit protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (138 aa)
rpmC50S ribosomal subunit protein L29; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uL29 family. (67 aa)
rpsQ30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (79 aa)
rplN50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rplX50S ribosomal subunit protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (106 aa)
rplE50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa)
rpsN30S ribosomal subunit protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
rpsH30S ribosomal subunit protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa)
rplF50S ribosomal subunit protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa)
rplR50S ribosomal subunit protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (120 aa)
rpsE30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (213 aa)
rpmD50S ribosomal protein L30; Function of strongly homologous gene; structure. (74 aa)
rplO50S ribosomal subunit protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (159 aa)
rpsM30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (125 aa)
rpsK30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (131 aa)
rplQ50S ribosomal protein L17; Function of homologous gene experimentally demonstrated in an other organism; structure. (140 aa)
rpmE50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. (77 aa)
XM1_2293Putative TetR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (222 aa)
mamKMagnetosome cytoskeleton protein MamK; Function of strongly homologous gene; putative enzyme. (347 aa)
ftsZ-2Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (311 aa)
XM1_2490Putative TetR family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (213 aa)
XM1_2620Putative Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (488 aa)
XM1_2762Homologs of previously reported genes of unknown function; Belongs to the SOS response-associated peptidase family. (186 aa)
XM1_2774Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (211 aa)
dnaB-2Replicative DNA helicase dnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (505 aa)
rplI50S ribosomal protein L9; Binds to the 23S rRNA. (185 aa)
rpsR30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (90 aa)
rpsF30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (144 aa)
rpsD30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (205 aa)
recODNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (236 aa)
rpmJPutative ribosome maturation protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure; Belongs to the bacterial ribosomal protein bL36 family. (41 aa)
parBPlasmid partitioning protein; Function of strongly homologous gene; enzyme. (289 aa)
rpmF50S ribosomal subunit protein L32; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL32 family. (60 aa)
rpsB30S ribosomal subunit protein S2; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uS2 family. (265 aa)
gyrADNA gyrase (type II topoisomerase), subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP [...] (895 aa)
XM1_3352Transposase of ISMdi7, IS21 family (ORF 2); Function of strongly homologous gene; enzyme. (279 aa)
parCDNA topoisomerase 4 subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (740 aa)
XM1_3396Transcriptional regulator; Function of strongly homologous gene; regulator. (225 aa)
rpsU30S ribosomal protein S21; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bS21 family. (67 aa)
XM1_3712Flagellar capping protein; Function of strongly homologous gene; structure. (426 aa)
draGADP-ribosyl-[dinitrogen reductase] glycohydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (308 aa)
XM1_4157Putative flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (94 aa)
parEDNA topoisomerase 4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (663 aa)
XM1_4268Putative transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (175 aa)
rarAReplication-associated recombination protein A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (429 aa)
flgHFlagellar L-ring protein flgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (263 aa)
flgGFlagellar component of cell-distal portion of basal-body rod flgG; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the flagella basal body rod proteins family. (261 aa)
flgFFlagellar basal-body rod protein flgF; Function of strongly homologous gene; structure; Belongs to the flagella basal body rod proteins family. (246 aa)
fliLFlagellar basal body-associated protein fliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (181 aa)
fliMFlagellar motor switch protein fliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (394 aa)
XM1_4377Putative Protein phosphatase CheZ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (212 aa)
rpsI30S ribosomal subunit protein S9; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uS9 family. (156 aa)
rplM50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (152 aa)
XM1_4424Putative transcriptional regulator TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (202 aa)
dnaGDNA primase dnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (624 aa)
XM1_4717Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (530 aa)
topADNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (902 aa)
fliIFlagellum-specific ATP synthase; Function of strongly homologous gene; structure. (450 aa)
rpsT30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (90 aa)
czcA-2Putative Flagellar hook protein FlgE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (830 aa)
FliFConserved exported protein of unknown function(Cytochrome c domain,10-223); The M ring may be actively involved in energy transduction. Belongs to the FliF family. (553 aa)
fliGPutative metal dependent phosphohydrolase; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (339 aa)
fliNFlagellar motor switching and energizing component FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (109 aa)
fliRFlagellar export pore protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (254 aa)
fliQ-2Flagellar biosynthesis protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
fliEFlagellar hook-basal body complex protein FliE; Function of homologous gene experimentally demonstrated in an other organism; structure. (103 aa)
flgC-2Flagellar component of cell-proximal portion of basal-body rod; Function of homologous gene experimentally demonstrated in an other organism; structure. (136 aa)
flgBFlagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (133 aa)
fliPFlagellar biosynthesis protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (251 aa)
rpsP30S ribosomal protein S16; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bS16 family. (121 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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