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XM1_3042 XM1_3042 XM1_3047 XM1_3047 ratA ratA fdhB fdhB fdnI1 fdnI1 napB napB napG napG nuoN nuoN nuoM nuoM nuoL nuoL nuoK nuoK nuoI nuoI nuoH nuoH nuoG nuoG nuoE nuoE gltA gltA XM1_3723 XM1_3723 glcB glcB hybO hybO icd icd icd2 icd2 XM1_0305 XM1_0305 lutA lutA fixN fixN fixP fixP acnB acnB hyaA hyaA hyaB hyaB hyaC hyaC XM1_0665 XM1_0665 XM1_0727 XM1_0727 XM1_0900 XM1_0900 XM1_1004 XM1_1004 XM1_1065 XM1_1065 hyfB hyfB hyfC hyfC hyfE hyfE hyfF hyfF hyfG hyfG XM1_1174 XM1_1174 sucA sucA sucD sucD sucC sucC mdh mdh sdhB sdhB sdhA sdhA sdhD sdhD sdhC sdhC XM1_1540 XM1_1540 XM1_1603 XM1_1603 XM1_1700 XM1_1700 XM1_1873 XM1_1873 XM1_1874 XM1_1874 XM1_1875 XM1_1875 XM1_2010 XM1_2010 ubiE ubiE XM1_2181 XM1_2181 hupS hupS hupL hupL fumC fumC acnA acnA XM1_2644 XM1_2644 XM1_2645 XM1_2645 XM1_2734 XM1_2734 XM1_2735 XM1_2735 XM1_2736 XM1_2736 XM1_2890 XM1_2890 ctaE ctaE ctaD ctaD hybA hybA hybB hybB hybC hybC hupK hupK norE norE norB norB XM1_4254 XM1_4254 XM1_4255 XM1_4255 hoxH hoxH hoxU hoxU XM1_4493 XM1_4493 XM1_4501 XM1_4501 XM1_4566 XM1_4566 dmsA dmsA dmsB dmsB dmsC dmsC ubiE-2 ubiE-2
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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XM1_3042Heme/copper-type cytochrome/quinol oxidase, subunit 1; Function of strongly homologous gene; enzyme. (560 aa)
XM1_3047Putative Permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (452 aa)
ratAOligoketide cyclase/lipid transport protein; Function of strongly homologous gene; enzyme. (142 aa)
fdhBFormate dehydrogenase iron-sulfur subunit; Function of strongly homologous gene; enzyme. (211 aa)
fdnI1Formate dehydrogenase, gamma subunit; Function of strongly homologous gene; enzyme. (326 aa)
napBNitrate reductase cytochrome c-type subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (151 aa)
napGFerredoxin-type protein napG homolog; Function of strongly homologous gene; carrier. (275 aa)
nuoNNADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (487 aa)
nuoMNADH-quinone oxidoreductase subunit M; Function of strongly homologous gene; enzyme. (504 aa)
nuoLNADH-quinone oxidoreductase subunit L; Function of strongly homologous gene; enzyme. (642 aa)
nuoKNADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (103 aa)
nuoINADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (162 aa)
nuoHNADH:ubiquinone oxidoreductase, membrane subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (341 aa)
nuoGNADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (690 aa)
nuoENADH dehydrogenase I chain E; Function of strongly homologous gene; enzyme. (202 aa)
gltACitrate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the citrate synthase family. (438 aa)
XM1_3723Tetrahydromethanopterin S-methyltransferase (fragment); Function of strongly homologous gene; enzyme. (85 aa)
glcBMalate synthase G (fragment); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (454 aa)
hybOHydrogenase 2, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (376 aa)
icdIsocitrate dehydrogenase [NADP]; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (405 aa)
icd2Isocitrate dehydrogenase [NADP]; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the monomeric-type IDH family. (741 aa)
XM1_0305Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (665 aa)
lutALactate utilization protein A, （Fe-S oxidoreductase subunit） Function of strongly homologous gene; enzyme. (249 aa)
fixNCytochrome C oxydase, CytN subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the heme-copper respiratory oxidase family. (483 aa)
fixPCytochrome C oxidase, CytP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (286 aa)
acnBBifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the aconitase/IPM isomerase family. (861 aa)
hyaAHydrogenase 1, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (372 aa)
hyaBHydrogenase 1, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (598 aa)
hyaCHydrogenase 1, b-type cytochrome subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier. (240 aa)
XM1_0665Putative Oligoketide cyclase/lipid transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (146 aa)
XM1_0727Putative electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (540 aa)
XM1_0900Putative dimethyl sulfoxide reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (683 aa)
XM1_1004Protein of unknown function; No homology to any previously reported sequences. (258 aa)
XM1_1065Formate dehydrogenase major subunit; Function of strongly homologous gene; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (889 aa)
hyfBHydrogenase 4 subunit B(NADH:ubiquinone/plastoquinone oxidoreductase,126-407); Function of homologous gene experimentally demonstrated in an other organism; membrane component. (669 aa)
hyfCFunction of strongly homologous gene; enzyme. (315 aa)
hyfEHydrogenase-4 component E; Function of homologous gene experimentally demonstrated in an other organism; membrane component. (221 aa)
hyfFHydrogenase-4 component F homolog(NADH:ubiquinone/plastoquinone oxidoreductase,129-409); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (496 aa)
hyfGHydrogenase-4 component G; Function of strongly homologous gene; enzyme. (506 aa)
XM1_1174Conserved protein of unknown function(Dihaem cytochrome c,69-188); Homologs of previously reported genes of unknown function. (191 aa)
sucA2-oxoglutarate dehydrogenase E1 component; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (989 aa)
sucDsuccinyl-CoA synthetase alpha chain(Succinyl-CoA ligase, alpha subunit,4-289); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (291 aa)
sucCsuccinyl-CoA synthetase, beta subunit(Succinyl-CoA synthetase, beta subunit,1-398); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (398 aa)
mdhMalate dehydrogenase(Malate dehydrogenase, type 3,3-313); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (319 aa)
sdhBSuccinate dehydrogenase / fumarate reductase, iron-sulfur subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier. (259 aa)
sdhASuccinate dehydrogenase flavoprotein subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (599 aa)
sdhDSuccinate dehydrogenase / fumarate reductase, membrane anchor subunit; Function of strongly homologous gene; membrane component. (126 aa)
sdhCSuccinate dehydrogenase / fumarate reductase, cytochrome b subunit; Function of strongly homologous gene; enzyme. (109 aa)
XM1_1540Putative molybdopterin oxidoreductase(Molybdopterin oxidoreductase,61-472); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (681 aa)
XM1_1603Putative Cytochrome B561（Di-haem cytochrome, transmembrane,2-179） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (179 aa)
XM1_1700Homologs of previously reported genes of unknown function. (431 aa)
XM1_1873Phenylacetyl-CoA:acceptor oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (928 aa)
XM1_1874Putative Fe-S-cluster-containing hydrogenase components 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (217 aa)
XM1_1875Protein of unknown function; No homology to any previously reported sequences. (314 aa)
XM1_2010Putative Fe-S oxidoreductase; Function of strongly homologous gene; putative enzyme. (449 aa)
ubiEUbiquinone/menaquinone biosynthesis C-methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (243 aa)
XM1_2181Putative Fe-S-cluster-containing hydrogenase components 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (159 aa)
hupSUptake hydrogenase small subunit; Function of strongly homologous gene; putative enzyme. (295 aa)
hupLUptake hydrogenase large subunit; Function of strongly homologous gene; putative enzyme. (512 aa)
fumCFumarate hydratase (fumarase C),aerobic Class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (460 aa)
acnAAconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (903 aa)
XM1_2644Putative Uptake hydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (481 aa)
XM1_2645Putative Uptake hydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (341 aa)
XM1_2734Putative Phenylacetyl CoA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (914 aa)
XM1_2735Putative formate-dependent nitrite reductase, 4Fe4S subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (217 aa)
XM1_2736Putative Phenylacetyl-CoA:acceptor oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (276 aa)
XM1_2890Putative S-adenosylmethionine-dependent; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (227 aa)
ctaECytochrome c oxidase subunit III; Function of strongly homologous gene; enzyme. (271 aa)
ctaDCytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (533 aa)
hybAHydrogenase 2 4Fe-4S ferredoxin-type component; Function of homologous gene experimentally demonstrated in an other organism; putative carrier. (339 aa)
hybBFunction of strongly homologous gene; carrier. (401 aa)
hybCHydrogenase 2, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (567 aa)
hupKHydrogenase expression/formation protein HupK; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (367 aa)
norECytochrome c oxidase, subunit III (NorE protein involved in nitric oxide reduction); Function of strongly homologous gene; enzyme. (189 aa)
norBNitric oxide reductase subunit B; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the heme-copper respiratory oxidase family. (446 aa)
XM1_4254Putative Fe-S-cluster-containing hydrogenase components 1 (HmeA/dsrO); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (233 aa)
XM1_4255Putative Hdr-like menaquinol oxidoreductase integral membrane subunit (HmeB/DsrP); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (403 aa)
hoxHNAD-reducing hydrogenase HoxS subunit beta (HoxH); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (499 aa)
hoxUNAD-reducing hydrogenase HoxS subunit gamma (HoxU); Function of strongly homologous gene; enzyme. (256 aa)
XM1_4493Function of strongly homologous gene; carrier. (229 aa)
XM1_4501Homologs of previously reported genes of unknown function. (140 aa)
XM1_4566Conserved protein of unknown function (Cytochrome b561, bacterial/Ni-hydrogenase 2-189); Homologs of previously reported genes of unknown function. (191 aa)
dmsAAnaerobic dimethyl sulfoxide reductase chain A; Function of strongly homologous gene; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (964 aa)
dmsBAnaerobic dimethyl sulfoxide reductase chain B; Function of strongly homologous gene; enzyme. (245 aa)
dmsCAnaerobic DMSO reductase anchor subunit; Function of strongly homologous gene; enzyme. (313 aa)
ubiE-2Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (252 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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