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XM1_0084 XM1_0084 czcB-2 czcB-2 xerC xerC XM1_0460 XM1_0460 XM1_0475 XM1_0475 XM1_0493 XM1_0493 XM1_0499 XM1_0499 XM1_0523 XM1_0523 XM1_0677 XM1_0677 engB engB XM1_0718 XM1_0718 ftsE ftsE XM1_0735 XM1_0735 ftsK ftsK XM1_0888 XM1_0888 XM1_1061 XM1_1061 XM1_1232 XM1_1232 folC folC xerD xerD XM1_1442 XM1_1442 ftsZ ftsZ ftsA ftsA ftsQ ftsQ murB murB murC murC murG murG ftsW ftsW murD murD mraY mraY murF murF murE murE ftsI ftsI XM1_1518 XM1_1518 XM1_1637 XM1_1637 XM1_2279 XM1_2279 XM1_2297 XM1_2297 XM1_2389 XM1_2389 ftsZ-2 ftsZ-2 XM1_2432 XM1_2432 XM1_2467 XM1_2467 murA murA XM1_2825 XM1_2825 XM1_2836 XM1_2836 XM1_2943 XM1_2943 XM1_2947 XM1_2947 XM1_2960 XM1_2960 XM1_2970 XM1_2970 XM1_3144 XM1_3144 XM1_3279 XM1_3279 XM1_3288 XM1_3288 XM1_3608 XM1_3608 tig tig XM1_3719 XM1_3719 XM1_3727 XM1_3727 XM1_3907 XM1_3907 cpoB cpoB pal pal tolB tolB XM1_4134 XM1_4134 XM1_4303 XM1_4303 mrdB mrdB XM1_4623 XM1_4623 XM1_4701 XM1_4701 XM1_4729 XM1_4729 XM1_4742 XM1_4742
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
XM1_0084Putative integrase/recombinase y4qK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 'phage' integrase family. (285 aa)
czcB-2Heavy metal RND efflux membrane fusion protein, CzcB family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (273 aa)
xerCSite-specific tyrosine recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (314 aa)
XM1_0460Homologs of previously reported genes of unknown function. (193 aa)
XM1_0475Homologs of previously reported genes of unknown function. (116 aa)
XM1_0493Homologs of previously reported genes of unknown function. (131 aa)
XM1_0499Integrase; Function of strongly homologous gene; enzyme. (188 aa)
XM1_0523Putative factor involved in shape determination and osmotic tolerance; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (98 aa)
XM1_0677Putative integrase/recombinase y4qK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (285 aa)
engBGTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. (187 aa)
XM1_0718Phage integrase family protein; Function of strongly homologous gene; enzyme. (189 aa)
ftsECell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (240 aa)
XM1_0735Putative Cell division protein （cell division ABC transporter FtsX fragment） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (298 aa)
ftsKDNA translocase FtsK; Function of homologous gene experimentally demonstrated in an other organism; cell process. (806 aa)
XM1_0888Putative UDP-N-acetylmuramyl pentapeptide phosphotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (338 aa)
XM1_1061UDP-N-acetylmuramate-alanine ligase; Function of strongly homologous gene; enzyme. (463 aa)
XM1_1232Putative Membrane-bound metallopeptidase（Duplicated hybrid motif,292-496） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (505 aa)
folCBifunctional folylpolyglutamate synthase and dihydrofolate synthase; Function of strongly homologous gene; putative enzyme; Belongs to the folylpolyglutamate synthase family. (434 aa)
xerDTyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (308 aa)
XM1_1442Putative FOG: TPR repeat(Tetratricopeptide-like helica,65-237); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (250 aa)
ftsZCell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (538 aa)
ftsACell division protein FtsA(Cell division protein FtsA,8-379); Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. (414 aa)
ftsQCell division protein FtsQ（Cell division protein FtsQ/DivIB,172-288） Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. (319 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (305 aa)
murCUDP-N-acetylmuramate:L-alanine ligase（UDP-N-acetylmuramate-alanine ligase,1-460） Cell wall formation; Belongs to the MurCDEF family. (476 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (371 aa)
ftsWLipid II flippase FtsW (Cell division protein FtsW; Function of homologous gene experimentally demonstrated in an other organism; membrane component; Belongs to the SEDS family. (376 aa)
murDUDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (457 aa)
mraYPhospho-N-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (362 aa)
murFUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (466 aa)
murEUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (486 aa)
ftsICell division protein FtsI (penicillin-binding protein 3); Function of strongly homologous gene; enzyme. (586 aa)
XM1_1518Putative Periplasmic protein TonB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (207 aa)
XM1_1637Putative Integrase（ntegrase-like, catalytic core,5-186） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (189 aa)
XM1_2279Putative integrase/recombinase y4qK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 'phage' integrase family. (297 aa)
XM1_2297Protein of unknown function; No homology to any previously reported sequences. (92 aa)
XM1_2389Putative integrase/recombinase y4qK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (285 aa)
ftsZ-2Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (311 aa)
XM1_2432Putative integrase/recombinase y4qK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (285 aa)
XM1_2467Putative integrase/recombinase y4qK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (285 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (432 aa)
XM1_2825Putative Integrase-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (193 aa)
XM1_2836Protein of unknown function; No homology to any previously reported sequences. (123 aa)
XM1_2943Homologs of previously reported genes of unknown function. (116 aa)
XM1_2947Homologs of previously reported genes of unknown function. (115 aa)
XM1_2960Putative Integrase-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (161 aa)
XM1_2970Protein of unknown function; No homology to any previously reported sequences. (33 aa)
XM1_3144Uncharacterized protein; Homologs of previously reported genes of unknown function. (368 aa)
XM1_3279Putative tetratricopeptide repeat transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (394 aa)
XM1_3288Putative segregation and condensation protein B homolog; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (216 aa)
XM1_3608Putative peptidyl-prolyl cis-trans isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (623 aa)
tigTrigger factor, chaperone involved in cell division; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (461 aa)
XM1_3719Putative integrase/recombinase y4qK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (285 aa)
XM1_3727Protein of unknown function; No homology to any previously reported sequences. (126 aa)
XM1_3907Putative Septum formation initiator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (88 aa)
cpoBConserved protein of unknown function （Tetratricopeptide-like helical 198-314） Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (330 aa)
palPeptidoglycan-associated outer membrane lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (161 aa)
tolBProtein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (447 aa)
XM1_4134Conserved protein of unknown function （Cell division protein ZapA-like 3-104） Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. (108 aa)
XM1_4303Putative integrase/recombinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (285 aa)
mrdBCell wall shape-determining protein mrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. (387 aa)
XM1_4623Putative phage Integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the 'phage' integrase family. (365 aa)
XM1_4701Outer membrane protein and related peptidoglycan-associated lipo protein; Function of strongly homologous gene; transporter. (168 aa)
XM1_4729Homologs of previously reported genes of unknown function. (125 aa)
XM1_4742Homologs of previously reported genes of unknown function. (98 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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