(14 nodes) Major facilitator superfamily network (Magnetospirillum sp. XM1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	XM1_2775	Putative monocarboxylate permease, transmembrane transport protein of the MFS family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (426 aa)
	XM1_4494	Putative permease of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (404 aa)
	benK	Benzoate transport protein; Function of strongly homologous gene; putative transporter. (453 aa)
	ampG	Permease of the major facilitator superfamily, AmpG-like; Function of homologous gene experimentally demonstrated in an other organism; transporter. (445 aa)
	pcaK	MFS transporter, AAHS family, 4-hydroxybenzoate transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter. (465 aa)
	XM1_1219	Bcr/CflA family efflux transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (400 aa)
	XM1_1319	Putative Permease of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the major facilitator superfamily. (523 aa)
	XM1_1385	Putative Permease of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (399 aa)
	XM1_1656	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (400 aa)
	mamH	Magnetosome protein MamH; Function of strongly homologous gene; putative membrane component. (431 aa)
	mamZ	Magnetosome protein MamZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using [...] (649 aa)
	XM1_4397	Putative permease of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (697 aa)
	XM1_2770	Putative transporter, Major facilitator superfamily MFS_1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (411 aa)
	XM1_3879	Permease of the major facilitator superfamily; Function of strongly homologous gene; enzyme. (392 aa)

Your Current Organism:

Magnetospirillum sp. XM1

NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
XM1_2775	XM1_4494	Putative monocarboxylate permease, transmembrane transport protein of the MFS family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative permease of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.578
XM1_4494	XM1_2775	Putative permease of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative monocarboxylate permease, transmembrane transport protein of the MFS family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.578