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ileS ileS nadD nadD panC panC XM1_0555 XM1_0555 trpS trpS gluQ gluQ XM1_0736 XM1_0736 leuS leuS XM1_0892 XM1_0892 XM1_0923 XM1_0923 XM1_0930 XM1_0930 XM1_0931 XM1_0931 asnB asnB XM1_1010 XM1_1010 XM1_1042 XM1_1042 queC queC XM1_1298 XM1_1298 argG argG etfB etfB etfA etfA lysS lysS nadE nadE gltX gltX cysS cysS XM1_1896 XM1_1896 tyrS tyrS mnmA mnmA etfA-2 etfA-2 etfB-2 etfB-2 XM1_2889 XM1_2889 cysH cysH cysD cysD valS valS metG metG XM1_3209 XM1_3209 coaD coaD argS argS etfB-3 etfB-3 etfA-3 etfA-3 gltX-2 gltX-2 XM1_4006 XM1_4006 tilS tilS etfA-4 etfA-4 ribF ribF rfaE rfaE XM1_4620 XM1_4620 guaA guaA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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ileSisoleucyl-tRNA synthetase ileS; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. (948 aa)
nadDPutative nicotinate-nucleotide adenylyltransferase NadD; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (203 aa)
panCPantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. (284 aa)
XM1_0555Putative Universal stress protein UspA-like nucleotide-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (155 aa)
trpSTryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (332 aa)
gluQGlutamyl-Q tRNA(Asp) synthetase; Function of strongly homologous gene; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family. (301 aa)
XM1_0736Homologs of previously reported genes of unknown function. (206 aa)
leuSleucyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family. (867 aa)
XM1_0892Putative Asparagine synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (585 aa)
XM1_0923Putative ADP-heptose synthase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. (518 aa)
XM1_0930Putative Asparagine synthase (glutamine-hydrolyzing); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (567 aa)
XM1_0931Putative Sulfate adenylyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (396 aa)
asnBAsparagine synthetase; Function of strongly homologous gene; enzyme. (626 aa)
XM1_1010Putative Asparagine synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (627 aa)
XM1_1042Putative Asparagine synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (630 aa)
queC7-cyano-7-deazaguanine synthase（Rossmann-like alpha/beta/alpha sandwich fold,2-225） Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (227 aa)
XM1_1298Asparagine synthetase（Asparagine synthase, glutamine-hydrolyzing,2-569） Function of strongly homologous gene; enzyme. (641 aa)
argGArgininosuccinate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (404 aa)
etfBElectron transfer flavoprotein beta-subunit(Electron transfer flavoprotein, beta subunit,1-249); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (249 aa)
etfAElectron transfer flavoprotein alpha-subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (311 aa)
lysSLysine--tRNA ligase; Function of strongly homologous gene; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family. (528 aa)
nadEGlutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. (551 aa)
gltXGlutamate--tRNA ligase 1(Glutamate-tRNA ligase, class Ib, bacterial/mitochondria,5-326); Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (443 aa)
cysScysteinyl-tRNA synthetase(Cysteinyl-tRNA synthetase/mycothiol ligase,3-459); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family. (459 aa)
XM1_1896Putative asparagine synthase(Asparagine synthase, glutamine-hydrolyzing,2-507); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (586 aa)
tyrStyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. (415 aa)
mnmAtRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (385 aa)
etfA-2Electron transfer flavoprotein alpha-subunit; Function of strongly homologous gene; enzyme. (312 aa)
etfB-2Electron transfer flavoprotein beta-subunit; Function of strongly homologous gene; enzyme. (249 aa)
XM1_2889Conserved protein of unknown function (Rossmann-like alpha/beta/alpha sandwich fold 9-139); Homologs of previously reported genes of unknown function. (178 aa)
cysHPhosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. (227 aa)
cysDSulfate adenylyltransferase, subunit 2; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (266 aa)
valSvalyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (889 aa)
metGMethionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. (516 aa)
XM1_3209DUF218 domain-containing protein; Homologs of previously reported genes of unknown function. (266 aa)
coaDPhosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (191 aa)
argSarginyl-tRNA synthetase; Function of strongly homologous gene; enzyme. (576 aa)
etfB-3Electron transfer flavoprotein beta-subunit; Function of strongly homologous gene; enzyme. (250 aa)
etfA-3Electron transfer flavoprotein alpha-subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (311 aa)
gltX-2Glutamate--tRNA ligase 2; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (477 aa)
XM1_4006Putative universal stress protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (273 aa)
tilStRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. (443 aa)
etfA-4Electron transfer flavoprotein alpha-subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (312 aa)
ribFBifunctional riboflavin kinase and FAD synthetase ribF; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ribF family. (329 aa)
rfaEFused heptose 7-phosphate kinase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. (488 aa)
XM1_4620Putative phosphoadenosine phosphosulfate reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (417 aa)
guaAGMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. (518 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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