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mamB-3 mamB-3 mamB mamB mamM mamM fieF fieF czcD-2 czcD-2 XM1_2407 XM1_2407 mamB-2 mamB-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mamB-3Magnetosome protein MamB; Function of strongly homologous gene; transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (296 aa)
mamBMagnetosome protein MamB; Function of strongly homologous gene; putative transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (296 aa)
mamMMagnetosome protein MamM; Function of strongly homologous gene; putative membrane component; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (318 aa)
fieFCation-efflux pump FieF; Function of strongly homologous gene; transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (300 aa)
czcD-2Co/Zn/Cd cation efflux transporter, CDF family; Function of homologous gene experimentally demonstrated in an other organism; transporter. (310 aa)
XM1_2407Putative Co/Zn/Cd efflux system component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (318 aa)
mamB-2Magnetosome protein MamB; Function of strongly homologous gene; putative transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (311 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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