STRINGSTRING
XM1_1793 XM1_1793 XM1_4427 XM1_4427 XM1_4542 XM1_4542 XM1_0138 XM1_0138 XM1_4403 XM1_4403
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XM1_1793Putative TonB-dependent receptor plug（TonB-dependent receptor, beta-barrel,167-669） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (670 aa)
XM1_4427Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (668 aa)
XM1_4542TonB-dependent receptor; Function of strongly homologous gene; transporter. (682 aa)
XM1_0138Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (707 aa)
XM1_4403TonB-dependent receptor; Function of strongly homologous gene; receptor. (701 aa)
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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