STRINGSTRING
BGLY_0661 BGLY_0661 BGLY_1313 BGLY_1313 BGLY_1332 BGLY_1332 speA speA sdaAB sdaAB sdaAA sdaAA yobN yobN BGLY_2230 BGLY_2230 BGLY_2502 BGLY_2502 ilvA ilvA metA metA BGLY_2929 BGLY_2929 BGLY_3092 BGLY_3092 ytbE ytbE speH speH yvgN yvgN yvcT yvcT speB speB speE speE BGLY_4456 BGLY_4456
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BGLY_0661Hypothetical protein. (123 aa)
BGLY_1313Hypothetical protein. (120 aa)
BGLY_1332Glyoxylase. (125 aa)
speAArginine decarboxylase. (496 aa)
sdaABPutative L-serine dehydratase, beta chain; Belongs to the iron-sulfur dependent L-serine dehydratase family. (220 aa)
sdaAAPutative L-serine dehydratase, alpha chain; Belongs to the iron-sulfur dependent L-serine dehydratase family. (300 aa)
yobNPutative L-amino-acid oxidase YobN. (480 aa)
BGLY_2230GCN5-related N-acetyltransferase. (175 aa)
BGLY_2502GCN5-like N-acetyltransferase. (178 aa)
ilvAL-threonine dehydratase biosynthetic IlvA; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (422 aa)
metAHomoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. (302 aa)
BGLY_2929Hypothetical protein. (212 aa)
BGLY_3092Zn-dependent hydrolase. (470 aa)
ytbEAldo/keto reductase. (281 aa)
speHS-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (128 aa)
yvgNGlyoxal reductase. (281 aa)
yvcT2-ketogluconate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (327 aa)
speBAgmatinase; Belongs to the arginase family. (290 aa)
speEPolyamine aminopropyltransferase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (276 aa)
BGLY_4456Glyoxylase. (149 aa)
Your Current Organism:
Bacillus glycinifermentans
NCBI taxonomy Id: 1664069
Other names: B. glycinifermentans, Bacillus glycinifermentans Kim et al. 2015, Bacillus sp. GO-13, Bacillus sp. KJ-17, KACC 18425, NRRL B-65291, strain GO-13
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