STRINGSTRING
ydaB ydaB yhfL yhfL BGLY_2350 BGLY_2350 BGLY_2351 BGLY_2351 dhaS dhaS BGLY_3163 BGLY_3163 ysiB ysiB lcfA lcfA fadA fadA yusL yusL adhB adhB acdA acdA mmgA mmgA BGLY_4675 BGLY_4675
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ydaBAMP-dependent synthetase/ligase. (503 aa)
yhfLlong-chain-fatty-acid-CoA ligase. (557 aa)
BGLY_2350enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
BGLY_23513-hydroxyisobutyryl-CoA hydrolase. (353 aa)
dhaSPutative aldehyde dehydrogenase DhaS; Belongs to the aldehyde dehydrogenase family. (494 aa)
BGLY_3163Cytochrome P450 CYP102A3; In the N-terminal section; belongs to the cytochrome P450 family. (1071 aa)
ysiBenoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
lcfALong chain acyl-CoA synthetase. (559 aa)
fadA3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
yusL3-hydroxyacyl-CoA dehydrogenase. (796 aa)
adhBAlcohol dehydrogenase. (340 aa)
acdAAcyl-CoA dehydrogenase. (379 aa)
mmgAacetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
BGLY_4675Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (867 aa)
Your Current Organism:
Bacillus glycinifermentans
NCBI taxonomy Id: 1664069
Other names: B. glycinifermentans, Bacillus glycinifermentans Kim et al. 2015, Bacillus sp. GO-13, Bacillus sp. KJ-17, KACC 18425, NRRL B-65291, strain GO-13
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