(5 nodes) Nitrate reductase (NADPH) activity, and Response to ethanol network (Phialophora attae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AB675_11140	Nitrate [NAD(P)H]. (1063 aa)
	AB675_507	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (872 aa)
	AB675_3456	Cytochrome b5 4; Belongs to the cytochrome b5 family. (311 aa)
	AB675_7926	Cytochrome b2, mitochondrial. (465 aa)
	AB675_6137	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. (480 aa)

Your Current Organism:

Phialophora attae

NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AB675_11140	AB675_3456	A0A0N0NIH4	A0A0N1H3V1	Nitrate [NAD(P)H].	Cytochrome b5 4; Belongs to the cytochrome b5 family.	0.940
AB675_11140	AB675_507	A0A0N0NIH4	A0A0N0NS70	Nitrate [NAD(P)H].	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.950
AB675_11140	AB675_6137	A0A0N0NIH4	A0A0N1P1G0	Nitrate [NAD(P)H].	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.926
AB675_11140	AB675_7926	A0A0N0NIH4	A0A0N1NZ28	Nitrate [NAD(P)H].	Cytochrome b2, mitochondrial.	0.911
AB675_3456	AB675_11140	A0A0N1H3V1	A0A0N0NIH4	Cytochrome b5 4; Belongs to the cytochrome b5 family.	Nitrate [NAD(P)H].	0.940
AB675_3456	AB675_507	A0A0N1H3V1	A0A0N0NS70	Cytochrome b5 4; Belongs to the cytochrome b5 family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.940
AB675_3456	AB675_6137	A0A0N1H3V1	A0A0N1P1G0	Cytochrome b5 4; Belongs to the cytochrome b5 family.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.918
AB675_3456	AB675_7926	A0A0N1H3V1	A0A0N1NZ28	Cytochrome b5 4; Belongs to the cytochrome b5 family.	Cytochrome b2, mitochondrial.	0.805
AB675_507	AB675_11140	A0A0N0NS70	A0A0N0NIH4	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Nitrate [NAD(P)H].	0.950
AB675_507	AB675_3456	A0A0N0NS70	A0A0N1H3V1	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Cytochrome b5 4; Belongs to the cytochrome b5 family.	0.940
AB675_507	AB675_6137	A0A0N0NS70	A0A0N1P1G0	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.926
AB675_507	AB675_7926	A0A0N0NS70	A0A0N1NZ28	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Cytochrome b2, mitochondrial.	0.911
AB675_6137	AB675_11140	A0A0N1P1G0	A0A0N0NIH4	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Nitrate [NAD(P)H].	0.926
AB675_6137	AB675_3456	A0A0N1P1G0	A0A0N1H3V1	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Cytochrome b5 4; Belongs to the cytochrome b5 family.	0.918
AB675_6137	AB675_507	A0A0N1P1G0	A0A0N0NS70	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.926
AB675_6137	AB675_7926	A0A0N1P1G0	A0A0N1NZ28	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Cytochrome b2, mitochondrial.	0.831
AB675_7926	AB675_11140	A0A0N1NZ28	A0A0N0NIH4	Cytochrome b2, mitochondrial.	Nitrate [NAD(P)H].	0.911
AB675_7926	AB675_3456	A0A0N1NZ28	A0A0N1H3V1	Cytochrome b2, mitochondrial.	Cytochrome b5 4; Belongs to the cytochrome b5 family.	0.805
AB675_7926	AB675_507	A0A0N1NZ28	A0A0N0NS70	Cytochrome b2, mitochondrial.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.911
AB675_7926	AB675_6137	A0A0N1NZ28	A0A0N1P1G0	Cytochrome b2, mitochondrial.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.831