STRINGSTRING
AB675_2985 AB675_2985 AB675_2906 AB675_2906 AB675_7326 AB675_7326 AB675_10384 AB675_10384 AB675_4274 AB675_4274 AB675_5813 AB675_5813 AB675_4986 AB675_4986 AB675_9520 AB675_9520 AB675_1942 AB675_1942 AB675_6977 AB675_6977 AB675_6376 AB675_6376 AB675_4259 AB675_4259 AB675_5723 AB675_5723 AB675_1664 AB675_1664 AB675_10458 AB675_10458 AB675_11536 AB675_11536 AB675_10586 AB675_10586 AB675_9573 AB675_9573 AB675_8632 AB675_8632 AB675_6009 AB675_6009 AB675_10647 AB675_10647 AB675_8440 AB675_8440 AB675_4042 AB675_4042 AB675_8582 AB675_8582 AB675_1847 AB675_1847 AB675_2747 AB675_2747
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_2985Nucleoporin nup44. (384 aa)
AB675_2906Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (885 aa)
AB675_7326Uncharacterized protein. (776 aa)
AB675_10384Putative nucleoporin. (1345 aa)
AB675_4274Ran-specific GTPase-activating protein 1. (233 aa)
AB675_5813Nucleoporin NIC96. (1157 aa)
AB675_4986Uncharacterized protein. (632 aa)
AB675_9520GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
AB675_1942RanBD1 domain-containing protein. (1465 aa)
AB675_6977Exportin-1. (1072 aa)
AB675_6376Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (405 aa)
AB675_4259Uncharacterized protein. (851 aa)
AB675_5723Nucleoporin. (1387 aa)
AB675_1664Nucleoporin. (1719 aa)
AB675_10458Nucleoporin. (1802 aa)
AB675_11536Nucleoporin. (1506 aa)
AB675_10586Nucleoprotein TPR. (1912 aa)
AB675_9573Protein pim1. (571 aa)
AB675_8632ELYS domain-containing protein. (302 aa)
AB675_6009Protein transport protein sec13; Belongs to the WD repeat SEC13 family. (343 aa)
AB675_10647Nucleoporin. (1836 aa)
AB675_8440Nucleoporin NSP1. (693 aa)
AB675_4042Poly(A)+ RNA export protein. (360 aa)
AB675_8582Nuclear pore complex protein NUP98A. (817 aa)
AB675_1847Ran-specific GTPase-activating protein 2. (566 aa)
AB675_2747Ran GTPase-activating protein 1. (419 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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