STRINGSTRING
AB675_2985 AB675_2985 AB675_2906 AB675_2906 AB675_10384 AB675_10384 AB675_5813 AB675_5813 AB675_6376 AB675_6376 AB675_5723 AB675_5723 AB675_1664 AB675_1664 AB675_6009 AB675_6009 AB675_10647 AB675_10647 AB675_8440 AB675_8440
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_2985Nucleoporin nup44. (384 aa)
AB675_2906Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (885 aa)
AB675_10384Putative nucleoporin. (1345 aa)
AB675_5813Nucleoporin NIC96. (1157 aa)
AB675_6376Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (405 aa)
AB675_5723Nucleoporin. (1387 aa)
AB675_1664Nucleoporin. (1719 aa)
AB675_6009Protein transport protein sec13; Belongs to the WD repeat SEC13 family. (343 aa)
AB675_10647Nucleoporin. (1836 aa)
AB675_8440Nucleoporin NSP1. (693 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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