22 items (Phialophora attae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Predicted Interactions

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Your Input:
	AB675_11664	DNA-directed RNA polymerase II subunit RPB2. (445 aa)
	AB675_8947	RPOL4c domain-containing protein. (156 aa)
	AB675_3956	DNA-directed RNA polymerase II subunit RPB1. (304 aa)
	AB675_4198	DNA-directed RNA polymerase II subunit RPB3. (199 aa)
	AB675_2305	DNA-directed RNA polymerase II subunit rpb7. (167 aa)
	AB675_4765	Transcription elongation factor S-II. (307 aa)
	AB675_3207	Transcription elongation factor spt5. (1377 aa)
	AB675_9928	DNA-directed RNA polymerase II subunit RPB11. (167 aa)
	AB675_5017	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (504 aa)
	AB675_8184	Uncharacterized protein. (551 aa)
	AB675_9675	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (123 aa)
	AB675_3328	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1064 aa)
	AB675_2061	DNA-directed RNA polymerases I, II, and III subunit RPABC5. (79 aa)
	AB675_5871	Uncharacterized protein. (465 aa)
	AB675_6284	Cell division control protein 73. (421 aa)
	AB675_11665	DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family. (724 aa)
	AB675_3957	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1431 aa)
	AB675_8178	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (589 aa)
	AB675_7709	RNA polymerase-associated protein. (606 aa)
	AB675_6395	FACT complex subunit spt16. (1024 aa)
	AB675_9665	Tetratricopeptide repeat protein 1. (1223 aa)
	AB675_886	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)

Your Current Organism:

Phialophora attae

NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AB675_11664	AB675_11665	A0A0N0NI85	A0A0N1NVV2	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family.	0.947
AB675_11664	AB675_2061	A0A0N0NI85	A0A0N1HCW2	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.963
AB675_11664	AB675_2305	A0A0N0NI85	A0A0N0NRW2	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase II subunit rpb7.	0.963
AB675_11664	AB675_3207	A0A0N0NI85	A0A0N1H181	DNA-directed RNA polymerase II subunit RPB2.	Transcription elongation factor spt5.	0.916
AB675_11664	AB675_3328	A0A0N0NI85	A0A0N1H8G8	DNA-directed RNA polymerase II subunit RPB2.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.916
AB675_11664	AB675_3956	A0A0N0NI85	A0A0N0NK16	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase II subunit RPB1.	0.936
AB675_11664	AB675_3957	A0A0N0NI85	A0A0N1NYV5	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.936
AB675_11664	AB675_4198	A0A0N0NI85	A0A0N0NL03	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase II subunit RPB3.	0.987
AB675_11664	AB675_4765	A0A0N0NI85	A0A0N1GYD2	DNA-directed RNA polymerase II subunit RPB2.	Transcription elongation factor S-II.	0.947
AB675_11664	AB675_5017	A0A0N0NI85	A0A0N1H3J9	DNA-directed RNA polymerase II subunit RPB2.	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]	0.904
AB675_11664	AB675_5871	A0A0N0NI85	A0A0N1HS59	DNA-directed RNA polymerase II subunit RPB2.	Uncharacterized protein.	0.814
AB675_11664	AB675_6284	A0A0N0NI85	A0A0N1HVC5	DNA-directed RNA polymerase II subunit RPB2.	Cell division control protein 73.	0.824
AB675_11664	AB675_6395	A0A0N0NI85	A0A0N1P0K8	DNA-directed RNA polymerase II subunit RPB2.	FACT complex subunit spt16.	0.935
AB675_11664	AB675_7709	A0A0N0NI85	A0A0N1NZK5	DNA-directed RNA polymerase II subunit RPB2.	RNA polymerase-associated protein.	0.776
AB675_11664	AB675_8178	A0A0N0NI85	A0A0N1NZ90	DNA-directed RNA polymerase II subunit RPB2.	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.	0.883
AB675_11664	AB675_8184	A0A0N0NI85	A0A0N1H5Q1	DNA-directed RNA polymerase II subunit RPB2.	Uncharacterized protein.	0.784
AB675_11664	AB675_886	A0A0N0NI85	A0A0N1P4A1	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.963
AB675_11664	AB675_8947	A0A0N0NI85	A0A0N0NIW5	DNA-directed RNA polymerase II subunit RPB2.	RPOL4c domain-containing protein.	0.963
AB675_11664	AB675_9665	A0A0N0NI85	A0A0N1P2F9	DNA-directed RNA polymerase II subunit RPB2.	Tetratricopeptide repeat protein 1.	0.853
AB675_11664	AB675_9675	A0A0N0NI85	A0A0N1H7B0	DNA-directed RNA polymerase II subunit RPB2.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.953