14 items (Phialophora attae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AB675_3625	WD repeat-containing protein mip1. (1461 aa)
	AB675_7974	Protein ste16. (1277 aa)
	AB675_9165	WAPL domain-containing protein. (888 aa)
	AB675_2091	Non-specific serine/threonine protein kinase. (604 aa)
	AB675_6198	WD repeat-containing protein wat1. (383 aa)
	AB675_5031	Stress-activated map kinase-interacting protein 1. (799 aa)
	AB675_5691	Ras-related GTP-binding protein A. (329 aa)
	AB675_6271	GTP-binding protein gtr2. (342 aa)
	AB675_5236	Uncharacterized protein. (146 aa)
	AB675_2688	Heat shock-like protein. (400 aa)
	AB675_2264	Non-specific serine/threonine protein kinase. (784 aa)
	AB675_116	Rap-GAP domain-containing protein. (1368 aa)
	AB675_6146	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2473 aa)
	AB675_8053	Exosome complex exonuclease RRP6. (810 aa)

Your Current Organism:

Phialophora attae

NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AB675_116	AB675_2091	A0A0N1NXJ5	A0A0N0NPK0	Rap-GAP domain-containing protein.	Non-specific serine/threonine protein kinase.	0.733
AB675_116	AB675_2264	A0A0N1NXJ5	A0A0N1NXG2	Rap-GAP domain-containing protein.	Non-specific serine/threonine protein kinase.	0.733
AB675_116	AB675_2688	A0A0N1NXJ5	A0A0N1HXH2	Rap-GAP domain-containing protein.	Heat shock-like protein.	0.999
AB675_116	AB675_3625	A0A0N1NXJ5	A0A0N0NJJ1	Rap-GAP domain-containing protein.	WD repeat-containing protein mip1.	0.807
AB675_116	AB675_5031	A0A0N1NXJ5	A0A0N1H8I0	Rap-GAP domain-containing protein.	Stress-activated map kinase-interacting protein 1.	0.510
AB675_116	AB675_5236	A0A0N1NXJ5	A0A0N1HNS4	Rap-GAP domain-containing protein.	Uncharacterized protein.	0.635
AB675_116	AB675_5691	A0A0N1NXJ5	A0A0N1HCM4	Rap-GAP domain-containing protein.	Ras-related GTP-binding protein A.	0.904
AB675_116	AB675_6146	A0A0N1NXJ5	A0A0N1P126	Rap-GAP domain-containing protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.909
AB675_116	AB675_6198	A0A0N1NXJ5	A0A0N0NQC9	Rap-GAP domain-containing protein.	WD repeat-containing protein wat1.	0.779
AB675_116	AB675_6271	A0A0N1NXJ5	A0A0N1HFF5	Rap-GAP domain-containing protein.	GTP-binding protein gtr2.	0.834
AB675_116	AB675_7974	A0A0N1NXJ5	A0A0N0NN19	Rap-GAP domain-containing protein.	Protein ste16.	0.578
AB675_116	AB675_8053	A0A0N1NXJ5	A0A0N1P148	Rap-GAP domain-containing protein.	Exosome complex exonuclease RRP6.	0.812
AB675_116	AB675_9165	A0A0N1NXJ5	A0A0N0NNK0	Rap-GAP domain-containing protein.	WAPL domain-containing protein.	0.963
AB675_2091	AB675_116	A0A0N0NPK0	A0A0N1NXJ5	Non-specific serine/threonine protein kinase.	Rap-GAP domain-containing protein.	0.733
AB675_2091	AB675_2688	A0A0N0NPK0	A0A0N1HXH2	Non-specific serine/threonine protein kinase.	Heat shock-like protein.	0.611
AB675_2091	AB675_3625	A0A0N0NPK0	A0A0N0NJJ1	Non-specific serine/threonine protein kinase.	WD repeat-containing protein mip1.	0.847
AB675_2091	AB675_5031	A0A0N0NPK0	A0A0N1H8I0	Non-specific serine/threonine protein kinase.	Stress-activated map kinase-interacting protein 1.	0.838
AB675_2091	AB675_5691	A0A0N0NPK0	A0A0N1HCM4	Non-specific serine/threonine protein kinase.	Ras-related GTP-binding protein A.	0.656
AB675_2091	AB675_6146	A0A0N0NPK0	A0A0N1P126	Non-specific serine/threonine protein kinase.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.884
AB675_2091	AB675_6198	A0A0N0NPK0	A0A0N0NQC9	Non-specific serine/threonine protein kinase.	WD repeat-containing protein wat1.	0.722