(12 nodes) Organellar small ribosomal subunit network (Phialophora attae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AB675_11249	Ribosomal protein S16, mitochondrial. (129 aa)
	AB675_6454	Uncharacterized protein. (271 aa)
	AB675_520	37S ribosomal protein S23, mitochondrial. (491 aa)
	AB675_7763	37S ribosomal protein S24, mitochondrial. (407 aa)
	AB675_9107	37S ribosomal protein S10, mitochondrial. (419 aa)
	AB675_4251	Putative 37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family. (413 aa)
	AB675_2098	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family. (233 aa)
	AB675_11826	37S ribosomal protein MRP2, mitochondrial. (113 aa)
	AB675_8634	37S ribosomal protein MRP4, mitochondrial. (426 aa)
	AB675_1709	Uncharacterized protein. (113 aa)
	AB675_9439	Uncharacterized protein. (355 aa)
	AB675_9784	37S ribosomal protein S9, mitochondrial. (323 aa)

Your Current Organism:

Phialophora attae

NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AB675_11249	AB675_11826	A0A0N0NMA2	A0A0N1HNR9	Ribosomal protein S16, mitochondrial.	37S ribosomal protein MRP2, mitochondrial.	0.999
AB675_11249	AB675_1709	A0A0N0NMA2	A0A0N1NWR4	Ribosomal protein S16, mitochondrial.	Uncharacterized protein.	0.999
AB675_11249	AB675_2098	A0A0N0NMA2	A0A0N1H868	Ribosomal protein S16, mitochondrial.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.999
AB675_11249	AB675_4251	A0A0N0NMA2	A0A0N1H7A7	Ribosomal protein S16, mitochondrial.	Putative 37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.	0.999
AB675_11249	AB675_520	A0A0N0NMA2	A0A0N0NRW7	Ribosomal protein S16, mitochondrial.	37S ribosomal protein S23, mitochondrial.	0.999
AB675_11249	AB675_6454	A0A0N0NMA2	A0A0N0NQB4	Ribosomal protein S16, mitochondrial.	Uncharacterized protein.	0.999
AB675_11249	AB675_7763	A0A0N0NMA2	A0A0N1H4J0	Ribosomal protein S16, mitochondrial.	37S ribosomal protein S24, mitochondrial.	0.999
AB675_11249	AB675_8634	A0A0N0NMA2	A0A0N1I047	Ribosomal protein S16, mitochondrial.	37S ribosomal protein MRP4, mitochondrial.	0.999
AB675_11249	AB675_9107	A0A0N0NMA2	A0A0N1H6M7	Ribosomal protein S16, mitochondrial.	37S ribosomal protein S10, mitochondrial.	0.999
AB675_11249	AB675_9439	A0A0N0NMA2	A0A0N1NX74	Ribosomal protein S16, mitochondrial.	Uncharacterized protein.	0.999
AB675_11249	AB675_9784	A0A0N0NMA2	A0A0N1P1N8	Ribosomal protein S16, mitochondrial.	37S ribosomal protein S9, mitochondrial.	0.999
AB675_11826	AB675_11249	A0A0N1HNR9	A0A0N0NMA2	37S ribosomal protein MRP2, mitochondrial.	Ribosomal protein S16, mitochondrial.	0.999
AB675_11826	AB675_1709	A0A0N1HNR9	A0A0N1NWR4	37S ribosomal protein MRP2, mitochondrial.	Uncharacterized protein.	0.999
AB675_11826	AB675_2098	A0A0N1HNR9	A0A0N1H868	37S ribosomal protein MRP2, mitochondrial.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.999
AB675_11826	AB675_4251	A0A0N1HNR9	A0A0N1H7A7	37S ribosomal protein MRP2, mitochondrial.	Putative 37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.	0.999
AB675_11826	AB675_520	A0A0N1HNR9	A0A0N0NRW7	37S ribosomal protein MRP2, mitochondrial.	37S ribosomal protein S23, mitochondrial.	0.999
AB675_11826	AB675_6454	A0A0N1HNR9	A0A0N0NQB4	37S ribosomal protein MRP2, mitochondrial.	Uncharacterized protein.	0.999
AB675_11826	AB675_7763	A0A0N1HNR9	A0A0N1H4J0	37S ribosomal protein MRP2, mitochondrial.	37S ribosomal protein S24, mitochondrial.	0.999
AB675_11826	AB675_8634	A0A0N1HNR9	A0A0N1I047	37S ribosomal protein MRP2, mitochondrial.	37S ribosomal protein MRP4, mitochondrial.	0.999
AB675_11826	AB675_9107	A0A0N1HNR9	A0A0N1H6M7	37S ribosomal protein MRP2, mitochondrial.	37S ribosomal protein S10, mitochondrial.	0.999