23 items (Phialophora attae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AB675_11664	DNA-directed RNA polymerase II subunit RPB2. (445 aa)
	AB675_3956	DNA-directed RNA polymerase II subunit RPB1. (304 aa)
	AB675_4198	DNA-directed RNA polymerase II subunit RPB3. (199 aa)
	AB675_2852	DNA-directed RNA polymerases I and III subunit RPAC1. (356 aa)
	AB675_4193	Uncharacterized protein. (404 aa)
	AB675_9928	DNA-directed RNA polymerase II subunit RPB11. (167 aa)
	AB675_5774	DNA-directed RNA polymerase III subunit RPC6. (440 aa)
	AB675_4965	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1190 aa)
	AB675_3950	RPA43_OB domain-containing protein. (478 aa)
	AB675_6942	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (502 aa)
	AB675_5183	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (628 aa)
	AB675_2061	DNA-directed RNA polymerases I, II, and III subunit RPABC5. (79 aa)
	AB675_5633	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1199 aa)
	AB675_1574	DNA-directed RNA polymerases I, II, and III subunit RPABC1. (237 aa)
	AB675_4191	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (639 aa)
	AB675_11665	DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family. (724 aa)
	AB675_3867	DNA-directed RNA polymerases I and III subunit RPAC2. (134 aa)
	AB675_4192	DNA-directed RNA polymerase, mitochondrial. (697 aa)
	AB675_3957	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1431 aa)
	AB675_7652	Uncharacterized protein. (166 aa)
	AB675_7653	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (304 aa)
	AB675_8263	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1570 aa)
	AB675_2361	DNA-directed RNA polymerases I, II, and III subunit RPABC2. (154 aa)

Your Current Organism:

Phialophora attae

NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AB675_11664	AB675_11665	A0A0N0NI85	A0A0N1NVV2	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family.	0.947
AB675_11664	AB675_1574	A0A0N0NI85	A0A0N1HKB5	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.979
AB675_11664	AB675_2061	A0A0N0NI85	A0A0N1HCW2	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.963
AB675_11664	AB675_2361	A0A0N0NI85	A0A0N1P2A8	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	0.982
AB675_11664	AB675_2852	A0A0N0NI85	A0A0N0NRC6	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerases I and III subunit RPAC1.	0.952
AB675_11664	AB675_3867	A0A0N0NI85	A0A0N1NXI7	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerases I and III subunit RPAC2.	0.920
AB675_11664	AB675_3950	A0A0N0NI85	A0A0N1H5A5	DNA-directed RNA polymerase II subunit RPB2.	RPA43_OB domain-containing protein.	0.930
AB675_11664	AB675_3956	A0A0N0NI85	A0A0N0NK16	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase II subunit RPB1.	0.936
AB675_11664	AB675_3957	A0A0N0NI85	A0A0N1NYV5	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.936
AB675_11664	AB675_4191	A0A0N0NI85	A0A0N1HRR5	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.601
AB675_11664	AB675_4192	A0A0N0NI85	A0A0N1NYA9	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase, mitochondrial.	0.601
AB675_11664	AB675_4193	A0A0N0NI85	A0A0N1H1Y0	DNA-directed RNA polymerase II subunit RPB2.	Uncharacterized protein.	0.915
AB675_11664	AB675_4198	A0A0N0NI85	A0A0N0NL03	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase II subunit RPB3.	0.987
AB675_11664	AB675_4965	A0A0N0NI85	A0A0N1H3A8	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.414
AB675_11664	AB675_5774	A0A0N0NI85	A0A0N1H2I0	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase III subunit RPC6.	0.908
AB675_11664	AB675_8263	A0A0N0NI85	A0A0N1P228	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.988
AB675_11664	AB675_9928	A0A0N0NI85	A0A0N1H2B6	DNA-directed RNA polymerase II subunit RPB2.	DNA-directed RNA polymerase II subunit RPB11.	0.963
AB675_11665	AB675_11664	A0A0N1NVV2	A0A0N0NI85	DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family.	DNA-directed RNA polymerase II subunit RPB2.	0.947
AB675_11665	AB675_1574	A0A0N1NVV2	A0A0N1HKB5	DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.979
AB675_11665	AB675_2061	A0A0N1NVV2	A0A0N1HCW2	DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.963