STRINGSTRING
AB675_823 AB675_823 AB675_5999 AB675_5999 AB675_10781 AB675_10781 AB675_1843 AB675_1843 AB675_2852 AB675_2852 AB675_4765 AB675_4765 AB675_4211 AB675_4211 AB675_4965 AB675_4965 AB675_3950 AB675_3950 AB675_10782 AB675_10782 AB675_476 AB675_476 AB675_2061 AB675_2061 AB675_1574 AB675_1574 AB675_4103 AB675_4103 AB675_346 AB675_346 AB675_3787 AB675_3787 AB675_1444 AB675_1444 AB675_8976 AB675_8976 AB675_3867 AB675_3867 AB675_5612 AB675_5612 AB675_5638 AB675_5638 AB675_2361 AB675_2361 AB675_9665 AB675_9665
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB675_823Uncharacterized protein. (192 aa)
AB675_5999Uncharacterized protein. (471 aa)
AB675_10781Putative RNA polymerase II transcription factor B subunit 1. (158 aa)
AB675_1843Uncharacterized protein. (327 aa)
AB675_2852DNA-directed RNA polymerases I and III subunit RPAC1. (356 aa)
AB675_4765Transcription elongation factor S-II. (307 aa)
AB675_4211DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
AB675_4965DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1190 aa)
AB675_3950RPA43_OB domain-containing protein. (478 aa)
AB675_10782Putative RNA polymerase II transcription factor B subunit 1. (452 aa)
AB675_476Serine/threonine-protein kinase KIN28; Belongs to the protein kinase superfamily. (415 aa)
AB675_2061DNA-directed RNA polymerases I, II, and III subunit RPABC5. (79 aa)
AB675_1574DNA-directed RNA polymerases I, II, and III subunit RPABC1. (237 aa)
AB675_4103RNA polymerase I-specific transcription initiation factor rrn3. (677 aa)
AB675_346Upstream activation factor subunit spp27. (295 aa)
AB675_3787DNA-binding protein reb1. (1215 aa)
AB675_1444TATA-binding protein-associated factor MOT1. (1858 aa)
AB675_8976Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (432 aa)
AB675_3867DNA-directed RNA polymerases I and III subunit RPAC2. (134 aa)
AB675_5612Uncharacterized protein. (910 aa)
AB675_5638Uncharacterized protein. (582 aa)
AB675_2361DNA-directed RNA polymerases I, II, and III subunit RPABC2. (154 aa)
AB675_9665Tetratricopeptide repeat protein 1. (1223 aa)
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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